MEGABLAST 2.2.4 [Aug-26-2002]


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), 
"A greedy algorithm for aligning DNA sequences", 
J Comput Biol 2000; 7(1-2):203-14.

Database: cneoA.nt 
           4935 sequences; 17,206,226 total letters

Searching.......... done
Query= 503384 11337 bp 2 contigs
         (11,337 letters)



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Contig3700                                                            785   0.0  
Contig3997                                                            664   0.0  
Contig634                                                             486   e-136
Contig1853                                                            339   1e-91

>Contig3700
          Length = 5631

 Score =  785 bits (396), Expect = 0.0
 Identities = 639/718 (88%), Gaps = 12/718 (1%)
 Strand = Plus / Minus

                                                                        
Query: 8723 gacggcagcccaccgcgccaatcaggttcatccaaattcgtcatcctcgggccgaacatt 8782
            |||||||||||||| || ||||||||||||||||||||  ||||||||||||||||||||
Sbjct: 4794 gacggcagcccaccacgtcaatcaggttcatccaaatttatcatcctcgggccgaacatt 4735

                                                                        
Query: 8783 ggacagtactttgaagtatcaagctcagaaggatccagctgcagttcttcgccttccact 8842
            ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| 
Sbjct: 4734 ggacagtactttgaagtatcaagctcagaaggatccaactgcagttcttctccttccacg 4675

                                                                        
Query: 8843 ccgtcgcattcgcctaaccgtctcaatcatcaacactcatttgacacttctaaaagccgt 8902
            || ||||||||||||||||||||||||||||  |||||||||||| |||| ||  |||||
Sbjct: 4674 ccatcgcattcgcctaaccgtctcaatcatcggcactcatttgacccttccaacggccgt 4615

                                                                        
Query: 8903 tcaccctctccgactgaatgtgacgagattgaccgggtagaatattcatctccagccata 8962
            |||| ||||||||| |||||||||||||||||| |||| ||||||||||||| | |||||
Sbjct: 4614 tcacgctctccgaccgaatgtgacgagattgactgggtggaatattcatctctatccata 4555

                                                                        
Query: 8963 gaaatggaagcatgccaaatgtcgggctgggacagtagtgtctccgagttgtcagagggc 9022
            |  ||||||||||| || ||| || |||||| |||||||||||| || ||||||||||| 
Sbjct: 4554 gggatggaagcatgtcagatgccgagctgggccagtagtgtctctgaattgtcagagggt 4495

                                                                        
Query: 9023 gactcggagacagagacttccgtgattattacccctgatagagatattcgggat-g--gt 9079
            ||||| |||||||||| ||||||||||||||| ||||||||||||||||||||| |  ||
Sbjct: 4494 gactcagagacagagagttccgtgattattactcctgatagagatattcgggatggtcgt 4435

                                                                        
Query: 9080 caaagtcagcgcttggatatccgggatatcgtaaggtggaaatacgctttgataagcctt 9139
            |||||||||||||||||||||| |||||||||||||||| | |||  |||| |||| |||
Sbjct: 4434 caaagtcagcgcttggatatccaggatatcgtaaggtggcagtacaatttggtaagtctt 4375

                                                                        
Query: 9140 gttaaacatatgtttcataggcct-tacttctcaaacagacctccatcaaatctgaacat 9198
            ||||||||||||||||||||| || |||||||||||||||| |||||||||||||||  |
Sbjct: 4374 gttaaacatatgtttcatagg-ctctacttctcaaacagacttccatcaaatctgaatgt 4316

                                                                        
Query: 9199 ccggctttgagaccgaatcgcttattatcttgccgtacaacttcgagccatacggtggta 9258
            | |||||||||||||||||||    |||||| ||| |||||||||||||||||||| || 
Sbjct: 4315 ctggctttgagaccgaatcgc---ctatcttcccgcacaacttcgagccatacggtagtg 4259

                                                                        
Query: 9259 cctcgtgactttaatcgtcgctgtagcgaatcttgctctgttacatc-ggcctcaagctc 9317
            ||| | |||||||||||||||||||||||| || | |||||| |||| || ||| |||||
Sbjct: 4258 ccttgcgactttaatcgtcgctgtagcgaacctcgttctgttgcatcagg-ctctagctc 4200

                                                                        
Query: 9318 tagttttcatgcccctcagccgggagagttgaa-ccaacatggagatactgtggcttgtg 9376
            ||||| | |||||||||||  ||||||    ||  |||||||||||||| ||||||||||
Sbjct: 4199 tagttctaatgcccctcagttgggaga-cccaagtcaacatggagataccgtggcttgtg 4141

                                                                      
Query: 9377 aagcttgcggtagaggcacgacaatcactaacgcaaaaaagattatgccttgtcaagt 9434
            |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 4140 aagcttgcggtagaggcacgaccatcactaacgcaaagaagattatgccttgtcaagt 4083



 Score =  753 bits (380), Expect = 0.0
 Identities = 541/594 (91%), Gaps = 3/594 (0%)
 Strand = Plus / Minus

                                                                         
Query: 10744 taccatatttttctccgttctaccgtattctt-cacatgtatctgcatatcaacgtaaca 10802
             ||||||| |||||||| || ||||||| | || ||||||||||||| |||  | | || |
Sbjct: 2753  taccatacttttctccattttaccgtactattccacatgtatctgcgtatttatgcaata 2694

                                                                         
Query: 10803 tacaatttccaagatacaacaggaattcaaacaagaaaaatcagatcctcaaccccgcac 10862
             ||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 2693  tacaatttccaagttacaacaggaatgcaaacaacaaaaatcagatcctcaaccccgcac 2634

                                                                         
Query: 10863 caaacttctttacacagataaggtttacctcatctctcatttgtctccatattctccacc 10922
             ||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||
Sbjct: 2633  caaacttctttacacagataaggttcacctcatccctcatttgcctccatattctccacc 2574

                                                                         
Query: 10923 attcccttccagcctcactcgcaccctcgtttaacccttcgtcctgtgcccacttt-tct 10981
             |||||||||||||||| ||| ||| ||| ||||| ||||| |||||| |||| ||| |||
Sbjct: 2573  attcccttccagcctcgctcacactctcatttaatccttcatcctgtcccca-tttctct 2515

                                                                         
Query: 10982 tttatgatcattctcatccatcgcaacacctcgacgactttctcaactccatccccaacc 11041
             ||||||||||  |||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 2514  tttatgatcaccctcatccatctcaacacctcgacgactttctcaactccatctccaacc 2455

                                                                         
Query: 11042 ctgccctcgccatcattcaaacattttttgagaaatgcagccactttaatagcatcctta 11101
              ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| 
Sbjct: 2454  ttgccctcgccatcattcaaacattttttgagaaatgcggccactttagtagcatccttg 2395

                                                                         
Query: 11102 tctgccggcggactatcttctctggactcgatccataattcaatagtcctgagcacatcg 11161
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2394  tctgccggcggactatcttctctggactcgatccataattcaatagttctgagcacatcg 2335

                                                                         
Query: 11162 ggaagctcggtcgagttcatgagagcgggtttgggcggcctgatgatcttgacactctgt 11221
             ||||||||||| ||||||||||| ||||||||||| ||| | |||||||||||| | |||
Sbjct: 2334  ggaagctcggttgagttcatgagggcgggtttggggggcttaatgatcttgacattttgt 2275

                                                                         
Query: 11222 ctctgctgcggcgggattgaccgtgatgtggagcggcctctgtacgcgccgacacctccc 11281
             ||||||||||| |||||||||||||||||||| |||||||||||| |||||||| |||||
Sbjct: 2274  ctctgctgcggtgggattgaccgtgatgtggaacggcctctgtacccgccgacaactccc 2215

                                                                   
Query: 11282 aacttgacaggtgagacactggtactcgtccctcttgatctggatctatcccca 11335
             || |||||||| |||||||| |||||||||||||| || ||||||||| |||||
Sbjct: 2214  aatttgacaggagagacactagtactcgtccctctcgacctggatctaccccca 2161



 Score =  726 bits (366), Expect = 0.0
 Identities = 511/558 (91%), Gaps = 8/558 (1%)
 Strand = Plus / Minus

                                                                         
Query: 9759  ctaaagatatcaggacatcactccggccattgttgaggccttccttccgagaaattcgtt 9818
             |||| |||||||||||||||||||||||| |||||||||||| |||||||||||||| ||
Sbjct: 3753  ctaatgatatcaggacatcactccggccactgttgaggcctttcttccgagaaattcatt 3694

                                                                         
Query: 9819  atctcaccgtacccttcaaccaatccatattctccttgacagattcgacgggcgtactaa 9878
             ||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 3693  atctcatagtacccttcaaccaatccatattctccttgacagattcgacggacgtacaaa 3634

                                                                         
Query: 9879  ggacta-c--ctg-g-tacgcccccttttaaagtctgctgctgtgctgaatactcgcttc 9933
             |||||| |   || | || ||| || |||| |||||  ||||||||||| ||||| ||||
Sbjct: 3633  ggactatctggtgtgctatgccgcc-tttagagtctattgctgtgctgattactcacttc 3575

                                                                         
Query: 9934  gaaaacagtatatcgaagccgcgacaccgcaagccgcacaaactatactcaagacctgtc 9993
             |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 3574  gaaaacagtatatcgaagccgcgacaccgcaagcggcacaaactatactcaagacctgtc 3515

                                                                         
Query: 9994  agaatactttcttgtccggaggagcgctcacttcgggaaggagacggcctgttaccatca 10053
             |||||| |||| |||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 3514  agaataatttcatgtccggaggagcgctcacttcgggaaggaaacggcctgttactatca 3455

                                                                         
Query: 10054 ctcccgtatcgcattcggagctcatagaagaactgcgtccacattcggctcaggaactcc 10113
             |||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 3454  ctcccgtatctcattcggagctcatagaagaactgcgtccacactcggcccaggaactcc 3395

                                                                         
Query: 10114 attcgctactcgctctttgtcaagctgctatagactcgaattctggatccaaac-aaagt 10172
             ||||||||||| ||||||||||||||||| | ||||| ||||||||||  |||| ||| |
Sbjct: 3394  attcgctactcactctttgtcaagctgctgtggactcaaattctggatgtaaactaaa-t 3336

                                                                         
Query: 10173 acttcaaagtatatcaagtctcgccatgggccatactacgccttgatgtcaacaatgagc 10232
             ||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||
Sbjct: 3335  acttcaaagtatatcaagtctcgccatggaccatactacgctttgatgtcagcaatgagc 3276

                                                                         
Query: 10233 aaaatgaatggggagcaaagtccctcttactgggacatgttctgtaagtggaatttgagt 10292
             ||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||| 
Sbjct: 3275  aaattgaatggggagcaaagtccttcttactgggacatgttctgtaagtgggattcgagc 3216

                               
Query: 10293 atggtcgtagagctcttg 10310
             ||| ||||||||||||||
Sbjct: 3215  atgatcgtagagctcttg 3198



 Score =  400 bits (202), Expect = e-110
 Identities = 300/332 (90%), Gaps = 4/332 (1%)
 Strand = Plus / Minus

                                                                         
Query: 10338 agacgtcgcctctggtaagaaggactttttggacttttcatcaggtccattatggcattc 10397
             ||||||||||||||||||||| || |||||| ||||| |||||| |||||||||||| ||
Sbjct: 3169  agacgtcgcctctggtaagaa-gaatttttgaactttccatcagttccattatggcagtc 3111

                                                                         
Query: 10398 gctgaccacttgaccgctgttcgtgatggggctaacaggagccatctccgcattaagtaa 10457
             ||||||| | |||||| ||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 3110  gctgaccgcatgaccgttgttcgtgacggggctaataggagccatctccgcattaagtaa 3051

                                                                         
Query: 10458 agcaataactcgccaggcctactttcgttcctcacaaggctcccctgctcgctcatatcc 10517
             |||||||||||||||| ||||||||| |||||||||| |||| |||||||||||||||||
Sbjct: 3050  agcaataactcgccagacctactttcattcctcacaaagctcgcctgctcgctcatatcc 2991

                                                                         
Query: 10518 c---accgacgccataactcttgtctctgaggaagatctgctcgtacgcaataaattact 10574
             |   |||||||||| |||||  ||||||||||||||| | || |||||||| ||||||||
Sbjct: 2990  cgccaccgacgccacaactcacgtctctgaggaagatatacttgtacgcaacaaattact 2931

                                                                         
Query: 10575 gatgttgttcgagaagtgttttggtatgatgccaagagctaattaactcagaggatcact 10634
             |||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 2930  gatgttgttcgagaggtgtttcggtatgatgccaagagctaattaactcagaggattact 2871

                                             
Query: 10635 atatcatcggggtgtacaggaatttgtacttg 10666
              |||||| ||| |||||||||||| |||||||
Sbjct: 2870  gtatcattgggatgtacaggaattcgtacttg 2839



 Score =  196 bits (99), Expect = 1e-48
 Identities = 112/116 (96%), Gaps = 2/116 (1%)
 Strand = Plus / Minus

                                                                        
Query: 8368 gaccgggaacgtacgagggaatggagacggcctttgagagcctgttgatgtagtcgtcct 8427
            ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 5355 gaccggg-acgtacgagggaatggacacggcctttgagagcctgttgatgtagtcgtcct 5297

                                                                    
Query: 8428 tgtggtcgtcgac-gtactggaggaacttgggatcggccattgctgtgcttgtggg 8482
            ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 5296 tgtggtcgtcgacagtactggaggaacttgggatcggccattgctgtgtttgtggg 5241


>Contig3997
          Length = 12734

 Score =  664 bits (335), Expect = 0.0
 Identities = 401/423 (94%)
 Strand = Plus / Minus

                                                                        
Query: 1282 accttgcgaatgtccaataaacccatcacgacgtcacctctgaccacttccttttcatct 1341
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1968 accttgcgaatgtccaataaacccatgacgacgtcacctctgaccacttccttttcatct 1909

                                                                        
Query: 1342 gttccaaccaccagcgccctccccacaaaactccttcccggcacatacttgcccacatcc 1401
            || || |||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 1908 gtaccgaccaccagcgccctgcccacaaaactccttccaggcacatacttgcccacatcc 1849

                                                                        
Query: 1402 cctcttcccttttcgtccacggcacgtacatccacttgatccaccgcaacagcataaacc 1461
            ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 1848 cctcttcccttttcgtccacggcacgtacatccacttgatccaccgccacggcataaacc 1789

                                                                        
Query: 1462 tgtacgagcacttggttctttcccgtctttcctgggggttttgagtgagagctaaactct 1521
            ||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||
Sbjct: 1788 tgtacgagcacttggttctttcccgtcttaccaggaggttttgagtgagaactaaactct 1729

                                                                        
Query: 1522 acaaggggcgggagctggtcacggaggtgtgcgggggtagcgttgtggtggtcaaatgtg 1581
            ||||||||||||||||||||||| |||||||||||||||||||| ||||| || ||||||
Sbjct: 1728 acaaggggcgggagctggtcacgaaggtgtgcgggggtagcgttatggtgatcgaatgtg 1669

                                                                        
Query: 1582 gaatggagtgtgatggatgccatggtggcgtgtggaagaccaaggatacgtgcgtctagg 1641
            |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||
Sbjct: 1668 gaatggagtgtgatggatgccatgctggcgtgtggaagaccaaggatacgggcgtctagg 1609

                                                                        
Query: 1642 tcgggcgctgatttggccgggtttgactgtttgtaagcgcccagaggtaaaatcaagttg 1701
            || || |||||||| ||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 1608 tcaggtgctgatttagccgggtttgattgtttgtaagcgcccaaaggtaaaatcaagttg 1549

               
Query: 1702 cta 1704
            |||
Sbjct: 1548 cta 1546



 Score =  648 bits (327), Expect = 0.0
 Identities = 412/440 (93%), Gaps = 2/440 (0%)
 Strand = Plus / Minus

                                                                        
Query: 767  actcactttccgccactcttcaatgctctttttgcagtgtcatacaccctttgcccaccc 826
            ||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||| 
Sbjct: 2498 actcactttccgccactcttcaatgctcttcgtgcagtgtcatacacccgttgcccacct 2439

                                                                        
Query: 827  tgggtgtcaaacacaaagtcatacccattttcctccagattgatcatcactgccgccgga 886
            || || ||||||||||||||||| ||||||||||||||||||||||||||||||||||| 
Sbjct: 2438 tgcgtatcaaacacaaagtcatatccattttcctccagattgatcatcactgccgccggc 2379

                                                                        
Query: 887  gaacccatgagcactcccttggccccattctcaatacacttt-tggtgagcctcatgcga 945
            ||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||
Sbjct: 2378 gaacccatgagcactcccttggccccattttcaataca-tttctggtgagcctcatgcga 2320

                                                                        
Query: 946  gtcgtccccaccggggacgatagccgtcacgtatacacctgcgcgggacatgacctgaca 1005
            ||||||||| || |||| |||||||||||| || ||||||||||| ||||| ||||| ||
Sbjct: 2319 gtcgtccccgccagggatgatagccgtcacatagacacctgcgcgagacatcacctggca 2260

                                                                        
Query: 1006 gacgagtgcggcgataccagtatgggcgttgatgataatggcgcggaactggcgattgag 1065
            |||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||
Sbjct: 2259 gacgagtgcggcgataccagtatgggcgttgatgacgatggcgcggaattggcgattgag 2200

                                                                        
Query: 1066 agagccacgaacgcatcgcgctgcagcgatgccttggagagggagaatcgagagttgttc 1125
            ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2199 agagccacggacgcatcgcgctgcagcgatgccttggagagggagaatagagagttgttc 2140

                                                                        
Query: 1126 gagtgtgagaagggtagggaatggtgctcgagagacacgtcgacggtcgacaagaatgta 1185
            ||||||||||||||||||||||||||| ||||| ||||||||||| || |||||||||||
Sbjct: 2139 gagtgtgagaagggtagggaatggtgcacgagaaacacgtcgacgatccacaagaatgta 2080

                                
Query: 1186 ctctgccaatgcgccgctct 1205
            ||||||||||||||||||||
Sbjct: 2079 ctctgccaatgcgccgctct 2060



 Score =  563 bits (284), Expect = e-159
 Identities = 351/373 (94%), Gaps = 1/373 (0%)
 Strand = Plus / Minus

                                                                        
Query: 351  aaaaagcagaacactagttgataatcctcacgaccctcacgccacactcatcccatcctt 410
            ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2931 aaaaagcag-acactaattgataatcctcacgaccctcacgccacactcatcccatcctt 2873

                                                                        
Query: 411  ggcgtttaaagacatctgctcccctttcaaagggcaccactgcgttctcaccttccagca 470
            | ||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 2872 gacgtttaaagacctctgctcccctttcaaagggcaccactgcgctctcaccttccaaca 2813

                                                                        
Query: 471  ctggcctaaaggatgccatacacggttcctccatcacatcgcggcaatccatcccggatg 530
            |||| ||||||| ||||||||||||||||||||||||||| ||||| ||||||||||| |
Sbjct: 2812 ctggtctaaaggttgccatacacggttcctccatcacatcacggcagtccatcccggacg 2753

                                                                        
Query: 531  cgtcaatctctggctcaccagacccgatgggagagacgtattcaaaggcgataaactttg 590
            ||||||||||||||||||||||||| ||||| ||||| |||||||||| |||||||||||
Sbjct: 2752 cgtcaatctctggctcaccagacccaatgggggagacatattcaaaggagataaactttg 2693

                                                                        
Query: 591  agtctttgcgttttgaaccaaacactgttctcagtgtcttgatgcccgacgggcgggaag 650
            | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 2692 aatctttgcgttttgaaccaaacactgttctcagtgtcttgatgccggacgggcgggaag 2633

                                                                        
Query: 651  ccaagtggggcgggacgcggttcagagttgtttcggggcgcttggtcgataccaatctac 710
            |||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 2632 ccaaatggggcgggacgcggttcagagttgcttcgggccgcttggtcgataccaatctac 2573

                         
Query: 711  agaatgcacattt 723
            | ||| |||||||
Sbjct: 2572 aaaatacacattt 2560



 Score =  299 bits (151), Expect = 1e-79
 Identities = 214/234 (91%), Gaps = 5/234 (2%)
 Strand = Plus / Minus

                                                                        
Query: 4    ttgatagatctccagtcatagggcctctagtccggcgcacaagaagtgcaaggtttttag 63
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 3284 ttgatagatctccagtcatagggcctctggtccggcgcacaagaagtgcaaggtttttag 3225

                                                                        
Query: 64   ggcgaagctggggtagttctacagggagagaagttgatggggaagcagagctcgggcaag 123
            |||||||||||| |||||||  |||| ||||||||||||||||||||||||| ||||| |
Sbjct: 3224 ggcgaagctgggatagttctgtagggggagaagttgatggggaagcagagctggggcagg 3165

                                                                        
Query: 124  cgggcagtagtatcggacgagattggtgtacaagagagatggatgaaggg-tatgggacg 182
            ||||| ||||| ||||||||| | |||||||||||||||||||||| ||| |||||||| 
Sbjct: 3164 cgggcggtagtgtcggacgaggtcggtgtacaagagagatggatga-gggatatgggact 3106

                                                                  
Query: 183  tttaatgattgatgac-att-gtatcgattttgtacaagtatcttg-gactgtt 233
            ||||||||||||| |  ||| ||| ||||||||||||||||||||| |||||||
Sbjct: 3105 tttaatgattgattaagatttgtaacgattttgtacaagtatcttgagactgtt 3052



 Score =  293 bits (148), Expect = 7e-78
 Identities = 179/189 (94%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                        
Query: 1755 actcacgtgtacccaggagcactttcttgatcccttccatgcgattccatcaacatc-cc 1813
            ||||||||||||||||||||||| |||||||||||||||||||| |||||||||| | ||
Sbjct: 1502 actcacgtgtacccaggagcactctcttgatcccttccatgcgactccatcaaca-cacc 1444

                                                                        
Query: 1814 atcaccatacgaactcccttcccactttgacccgcctgtaaatctatacccagcagcgct 1873
            |||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||
Sbjct: 1443 atcaccatacgaactcccttcccactttgacccgcctccaaacctatacccagcagcgct 1384

                                                                        
Query: 1874 cttcgacctcttgatcatggacggtaaaggcaattcagccaatccatcatctttttcgcc 1933
            ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 1383 ctttgacctcttgatcatggacggtaaaggcaattcagccaatccatcatcttcttcccc 1324

                     
Query: 1934 tgcctcact 1942
            |||||||||
Sbjct: 1323 tgcctcact 1315



 Score =  252 bits (127), Expect = 2e-65
 Identities = 220/250 (88%), Gaps = 6/250 (2%)
 Strand = Plus / Minus

                                                                        
Query: 1969 gaccgtggccgacttcgctcctcgagcctctaaagatgctagactttctcgaatgcgaca 2028
            |||||||||| ||||| ||| |||||||||| || | ||||||| || ||||||||||||
Sbjct: 1279 gaccgtggcccacttcactcttcgagcctctgaatacgctagaccttgtcgaatgcgaca 1220

                                                                        
Query: 2029 aatgtcctcctccattatcgtggtacatggataaccttgagcggctcctctcgggagggg 2088
            | ||  | || ||||||||||| |||| ||||||||| ||||| |||||||||||||| |
Sbjct: 1219 actg--c-ccaccattatcgtgatacacggataacctcgagcgactcctctcgggaggtg 1163

                                                                        
Query: 2089 gtgaaga---gcgatagagacgttcagagtcttggggggtcatctctggaaggatggtga 2145
            |||||||   |||||||||||||||||||||||| || ||||| ||||||||||||||||
Sbjct: 1162 gtgaagaggggcgatagagacgttcagagtcttgcggcgtcatttctggaaggatggtga 1103

                                                                        
Query: 2146 ggatgtcggggtccaggaaggaaggcggttcaaaccctgcccgcggagttgttggacgtg 2205
            |||||||||||||||||||||| || ||||| ||||||||||| || |||||||| ||||
Sbjct: 1102 ggatgtcggggtccaggaaggaggggggttcgaaccctgcccggggggttgttgggcgtg 1043

                      
Query: 2206 tagggatagg 2215
            ||||||||||
Sbjct: 1042 tagggatagg 1033



 Score =  143 bits (72), Expect = 1e-32
 Identities = 90/96 (93%)
 Strand = Plus / Minus

                                                                        
Query: 2279 tgagggagatgtaggacgagagtattgagagagacggccaggtgatgacgatgatggggg 2338
            |||||||||||||||||||||||||||||||||||| | ||| |||||| |||| |||||
Sbjct: 960  tgagggagatgtaggacgagagtattgagagagacgacaaggcgatgacaatgacggggg 901

                                                
Query: 2339 taaaggcgatggggtccttggcggatagacgggagc 2374
            |||||||||||||||||||||||| |||||||||||
Sbjct: 900  taaaggcgatggggtccttggcgggtagacgggagc 865



 Score =  121 bits (61), Expect = 5e-26
 Identities = 142/168 (84%), Gaps = 5/168 (2%)
 Strand = Plus / Minus

                                                                        
Query: 3164 ttcgtcatctgagcctgcttggcctgatgcactctccatatcctcgtcgtcctttgaagg 3223
            |||||| ||||||||||||||||||||||||||||||||||| ||||| ||||| | |||
Sbjct: 165  ttcgtcgtctgagcctgcttggcctgatgcactctccatatcgtcgtcatccttgggagg 106

                                                                        
Query: 3224 aagaggcggcggctgttccg-ccgtgttgcgaggggggttgattactctaggtgcaagag 3282
            |||||| || || | ||||  || |||||||||||||| |||| || ||| |||| || |
Sbjct: 105  aagaggtggaggtt-ttcccaccatgttgcgaggggggatgatcaccctaagtgccag-g 48

                                                            
Query: 3283 -tgggacgagaggtggtatgcggtaggtggtcgggatggagggcggat 3329
             |||| | ||||||||||| |||||| ||||| ||||| |||| ||||
Sbjct: 47   ctggggccagaggtggtat-cggtagatggtctggatgaagggaggat 1



 Score =  103 bits (52), Expect = 1e-20
 Identities = 70/76 (92%)
 Strand = Plus / Minus

                                                                        
Query: 3041 gtgcgaacgccgcgacgaggagcgaatggactgtgctctgctacaaggccgggaagacga 3100
            |||||| |||||||| |||||||||||||||||||||||||||||||||| ||| || ||
Sbjct: 273  gtgcgagcgccgcgatgaggagcgaatggactgtgctctgctacaaggcctggaggaaga 214

                            
Query: 3101 tttgggagtgcgtgag 3116
            ||||||||||| ||||
Sbjct: 213  tttgggagtgcatgag 198


>Contig634
          Length = 858

 Score =  486 bits (245), Expect = e-136
 Identities = 304/323 (94%), Gaps = 3/323 (0%)
 Strand = Plus / Minus

                                                                        
Query: 7620 tatatatatacgtaccagaaatacacatgcagtcaacaccggcgaaaaacttgtcctttt 7679
            ||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 321  tatatat-tacgtaccagaaatgcacatgcagtcaacaccggcgaagaacttgtcctttt 263

                                                                        
Query: 7680 cagattcaataaacttgtccaggttgacagaaccattctcctccataccctcaaaacaga 7739
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 262  cagattcaataaacttgtcaaggttgacagaaccattctcctccataccctcaaaacaga 203

                                                                        
Query: 7740 ctttgaggttgacaggaagctcgataccaagcttcttgtgcgcctcgaggacgtttaacc 7799
            ||||||| |||||||||||||| |||||||||||||| ||||||||||| ||||| ||||
Sbjct: 202  ctttgagattgacaggaagctcaataccaagcttcttatgcgcctcgagaacgttcaacc 143

                                                                        
Query: 7800 agcccatgactggacccttgtcatcggttgagccacggccgtaaagtcggccactgccgt 7859
            |||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 142  agcccatgacaggacccttgtcatccgttgagccacggccgtagagtcggccactgccgt 83

                                                                        
Query: 7860 tgggatcgggggtgagctcaaagggagggtagagccagccgtcttcgagtaga-gcgggt 7918
            ||||||| |||||||||||||| |||||||||||||||||||||||||| | | ||||||
Sbjct: 82   tgggatccggggtgagctcaaacggagggtagagccagccgtcttcgagca-atgcgggt 24

                                   
Query: 7919 tggacatcgtagtggccatagac 7941
            ||||| ||||||||||| |||||
Sbjct: 23   tggacgtcgtagtggccgtagac 1



 Score =  291 bits (147), Expect = 3e-77
 Identities = 162/167 (97%)
 Strand = Plus / Minus

                                                                        
Query: 7410 cttactgagagcgataagatccgtcatcggttcgtggacggtaccgccaaagacaccaga 7469
            |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 540  cttactgagagcgacaaggtccgtcatcggttcgtggacggtaccgccaaagacaccaga 481

                                                                        
Query: 7470 gtgaagatccctgtcaggcccagaaatcttgatctcgtaatagttgatacctctgagacc 7529
            ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480  gtggagatccctgtcaggcccagaaatcttgatctcgtaatagttgatacctctgagacc 421

                                                           
Query: 7530 ataagtgagacagggggtcttggtgtcaagccagtaattgtctatat 7576
            |||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 420  ataagtgagacacggggtcttggtgtcaagccagtagttgtctatat 374



 Score =  224 bits (113), Expect = 5e-57
 Identities = 183/206 (88%), Gaps = 2/206 (0%)
 Strand = Plus / Minus

                                                                        
Query: 7180 aaacccacagtcgtaacagtgtcgtcggagatggtgacctcaccaccaacagc-ggcatg 7238
            |||| ||||||| |||| || ||| | || |||||||| |||||||| |||||  |||||
Sbjct: 783  aaactcacagtcttaacggtatcgcccgatatggtgacttcaccaccgacagcatgcatg 724

                                                                        
Query: 7239 aatatcttccatctggaagtggatagcctcaaacttggctcgctcatcgtcggtgacagg 7298
            |||||||| ||||| ||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 723  aatatcttgcatctcgaaatggatagcttcaaacttggctcgctcatcgtcggtgacagg 664

                                                                        
Query: 7299 cgcgatgaggtccttgataccggtaacgaggatctggccgtcgggagtgacaagcttgga 7358
             |||||||||||||||| |||| ||||||||||||||||||||||||| |||||| ||||
Sbjct: 663  ggcgatgaggtccttgacaccgctaacgaggatctggccgtcgggagtaacaagcctgga 604

                                      
Query: 7359 cactatatataacactcgtcagctct 7384
            ||||| ||| |||||| |||||||||
Sbjct: 603  cactagata-aacacttgtcagctct 579


>Contig1853
          Length = 2314

 Score =  339 bits (171), Expect = 1e-91
 Identities = 204/215 (94%)
 Strand = Plus / Plus

                                                                        
Query: 6406 aaatactcactcggatgtagttgtcagtgtcaatcttctcgttggtggaatgagctccgt 6465
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1691 aaatacgcactcggatgtagttgtcagtgtcaatcttctcgttggtggaatgagctccgt 1750

                                                                        
Query: 6466 catcaccccttccgacaggtaacaaaaggacgttgaggttgagaatgttggcaaagtcga 6525
            ||||||||||||||||||| ||||  ||||| ||||||||||||||||||||||||||||
Sbjct: 1751 catcaccccttccgacaggcaacaggaggacattgaggttgagaatgttggcaaagtcga 1810

                                                                        
Query: 6526 gggtgacagggatagaaccgccttcacgggtgtagtcgggcacttggccgtaaacagact 6585
            | ||||||||||| |||||||||||||||||||| || |||||||||||||||||||| |
Sbjct: 1811 gagtgacagggatggaaccgccttcacgggtgtaatcaggcacttggccgtaaacagatt 1870

                                               
Query: 6586 cggtagccttgtgcgccgctcgataagagtagtgc 6620
            ||||||||||||||||||| |||||||||||||||
Sbjct: 1871 cggtagccttgtgcgccgcacgataagagtagtgc 1905



 Score =  285 bits (144), Expect = 2e-75
 Identities = 243/274 (88%), Gaps = 11/274 (4%)
 Strand = Plus / Plus

                                                                        
Query: 6630 ggtcagtctttatcatccacttgcatt-gttgccaaccgtgctcacattggggtcagcct 6688
            ||||||||||||| || ||||||||||  || |||| | ||||||| |||||||||||||
Sbjct: 1933 ggtcagtctttat-at-cacttgcattattttccaatcatgctcacgttggggtcagcct 1990

                                                                        
Query: 6689 gaaag-aaaacgattgtcagcc---tctttacattcatcaa-cactcgccgggggcataa 6743
            ||||| ||||| ||||||||||   | |||||||||||||| || || || |||| |  |
Sbjct: 1991 gaaagcaaaaccattgtcagccttttttttacattcatcaacca-tc-cc-ggggaacca 2047

                                                                        
Query: 6744 ctcacaatccaaggctcaccaccgtgagtgagatacacctccatcttgttcttggaacca 6803
            |||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||
Sbjct: 2048 ctcacaatccaaggctcaccgccatgagtaagatacacctccatcttgttcttggaacca 2107

                                                                        
Query: 6804 agttttttgaattcttcctcaacgtacttgacgacgaggtcagtcacactggcaacagtg 6863
            ||||| ||||| ||||||||||||||||||||||| ||||| || || ||||| ||||||
Sbjct: 2108 agtttcttgaactcttcctcaacgtacttgacgacaaggtcggtgacgctggcgacagtg 2167

                                              
Query: 6864 aggttgggtacaagacggatagagaatttgccta 6897
            ||||||||||||||||||||||||||||||||||
Sbjct: 2168 aggttgggtacaagacggatagagaatttgccta 2201



 Score = 71.9 bits (36), Expect = 5e-11
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                                
Query: 6963 acccttgacacagcagggaatcacagtcttggaacc 6998
            ||||||||||||||||||||||||||||||||||||
Sbjct: 2277 acccttgacacagcagggaatcacagtcttggaacc 2312


  Database: cneoA.nt
    Posted date:  Dec 12, 2002  3:26 PM
  Number of letters in database: 17,206,226
  Number of sequences in database:  4935
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 0, Extension: 0
Number of Hits to DB: 9213
Number of Sequences: 4935
Number of extensions: 21
Number of successful extensions: 21
Number of sequences better than 1.0e-01: 4
length of query: 11337
length of database: 17,206,226
effective HSP length: 19
effective length of query: 11318
effective length of database: 17,112,461
effective search space: 193678833598
effective search space used:        0
S2: 21 (42.1 bits)
