      9   1425

Pdel181_DNA2  ATG TCA CCA CAA ACA GAG ACT AAA ACA GGT GTT GGA TTC AAG GCT GGT GTT AAA GAT TAT AAA TTG ACT TAT TAT ACT CCT GAG TAT GAA ACC AAA GAT ACT GAT ATC TTG GCA GCA TTC CGA GTA ACT CCT CAA CCT GGA GTT CCG CCC GAG GAA GCA GGG GCC GCA GTA GCT GCT GAA TCT TCT ACT GGT ACA TGG ACA ACT GTG TGG ACC GAC GGG CTT ACC AGT CTT GAT CGT TAT AAG GGA CGA TGC TAC GAC ATC GAG CCC GTT GCT GGA GAA GAA AAT CAA TTT ATT GCT TAT GTA GCT TAC CCC TTA GAC CTT TTT GAA GAA GGT TCT GTT ACT AAC ATG TTT ACT TCC ATT GTG GGT AAT GTA TTT GGG TTC AAA GCC CTA CGC GCT CTA CGT CTG GAG GAT TTG CGA ATT CCT CCT GCT TAT GTT AAA ACT TTT CAA GGC CCA CCT CAT GGT ATC CAA GTT GAA AGA GAT AAA TTG AAC AAG TAT GGT CGC CCC CTA TTG GGC TGT ACT ATT AAA CCT AAA TTG GGG TTA TCC GCT AAG AAT TAC GGT AGA GCA GTT TAT GAA TGT CTA CGC GGT GGA CTT GAT TTT ACC AAA GAT GAT GAG AAC GTG AAC TCC CAA CCA TTT ATG CGT TGG AGA GAT CGT TTC TTA TTT TGT GCC GAA GCA CTT TAT AAA GCA CAG GCT GAA ACC GGT GAA ATC AAA GGG CAT TAT TTA AAC GCT ACT GCA GGT ACA TGC GAA GAA ATG ATC AAA AGG GCT GTA TTT GCC AGA GAA TTG GGA GTT CCT ATC GTA ATG CAT GAC TAC TTA ACA GGG GGA TTC ACC GCA AAC ACT ACT TTG GCT CAT TAT TGC CGA GAT AAT GGT TTA CTT CTT CAC ATC CAT CGC GCA ATG CAT GCA GTT ATT GAT AGA CAG AAA AAT CAT GGT ATG CAC TTT CGT GTA CTA GCT AAG GCA TTA CGT ATG TCT GGT GGA GAT CAT ATT CAC TCT GGT ACC GTA GTA GGT AAA CTT GAA GGG GAA AGA GAC ATA ACT TTG GGT TTT GTT GAT TTA CTG CGT GAT GAT TTT GTT GAA AAA GAT CGA AGC CGC GGT ATT TAT TTC ACT CAA GAT TGG GTC TCT CTA CCG GGT GTT CTG CCC GTG GCT TCG GGG GGT ATT CAC GTT TGG CAT ATG CCT GCT CTG ACC GAG ATC TTT GGA GAT GAT TCC GTA CTA CAA TTC GGT GGA GGA ACT TTA GGG CAC CCT TGG GGA AAT GCA CCC GGT GCC GTT GCT AAT CGA GTA GCT CTA GAA GCA TGT GTA CAA GCT CGT AAT GAG GGA CGT GAT CTT GCT CGT GAG GGT AAT GAA ATT ATC CGT GAA GCT AGC AAA TGG AGC CCT GAA CTA GCT GCT GCT TGT GAA GTA TGG AAG GAG ATT AAA TTT GAA TTC CAA GCA ATG GAT ACG TTG
Pfre186_DNA2  ATG TCA CCA CAA ACA GAG ACT AAA ACA GGT GTT GGA TTC AAG GCT GGT GTT AAA GAT TAT AAA TTG ACT TAT TAT ACT CCT GAG TAT GAA ACC AAA GAT ACT GAT ATC TTG GCA GCA TTC CGA GTA ACT CCT CAA CCT GGA GTT CCG CCC GAG GAA GCA GGG GCC GCA GTA GCT GCT GAA TCT TCT ACT GGT ACA TGG ACA ACT GTG TGG ACC GAC GGG CTT ACC AGT CTT GAT CGT TAT AAG GGA CGA TGC TAC GAC ATC GAG CCC GTT GCT GGA GAA GAA AAT CAA TTT ATT GCT TAT GTA GCT TAC CCC TTA GAC CTT TTT GAA GAA GGT TCT GTT ACT AAC ATG TTT ACT TCC ATT GTG GGT AAT GTA TTT GGG TTC AAA GCC CTA CGC GCT CTA CGT CTG GAG GAT TTG CGA ATT CCT CCT GCT TAT GTT AAA ACT TTT CAA GGC CCA CCT CAT GGT ATC CAA GTT GAA AGA GAT AAA TTG AAC AAG TAT GGT CGC CCC CTA TTG GGC TGT ACT ATT AAA CCT AAA TTG GGG TTA TCC GCT AAG AAT TAC GGT AGA GCA GTT TAT GAA TGT CTA CGC GGT GGA CTT GAT TTT ACC AAA GAT GAT GAG AAC GTG AAC TCC CAA CCA TTT ATG CGT TGG AGA GAT CGT TTC TTA TTT TGT GCC GAA GCA CTT TAT AAA GCA CAG GCT GAA ACC GGT GAA ATC AAA GGG CAT TAT TTA AAC GCT ACT GCA GGT ACA TGC GAA GAA ATG ATC AAA AGG GCT GTA TTT GCC AGA GAA TTG GGA GTT CCT ATC GTA ATG CAT GAC TAC TTA ACA GGG GGA TTC ACC GCA AAC ACT ACT TTG GCT CAT TAT TGC CGA GAT AAT GGT TTA CTT CTT CAC ATC CAT CGC GCA ATG CAT GCA GTT ATT GAT AGA CAG AAA AAT CAT GGT ATG CAC TTT CGT GTA CTA GCT AAG GCA TTA CGT ATG TCT GGT GGA GAT CAT ATT CAC TCT GGT ACC GTA GTA GGT AAA CTT GAA GGG GAA AGA GAC ATA ACT TTG GGT TTT GTT GAT TTA CTG CGT GAT GAT TTT ATT GAA AAA GAT CGA AGC CGC GGT ATT TAT TTC ACT CAA GAT TGG GTC TCT CTA CCG GGT GTT CTG CCC GTG GCT TCG GGG GGT ATT CAC GTT TGG CAT ATG CCT GCT CTG ACC GAG ATC TTT GGA GAT GAT TCC GTA CTA CAA TTC GGT GGA GGA ACT TTA GGG CAC CCT TGG GGA AAT GCA CCC GGT GCC GTT GCT AAT CGA GTA GCT CTA GAA GCA TGT GTA CAA GCT CGT AAT GAG GGA CGT GAT CTT GCT CGT GAG GGT AAT GAA ATT ATC CGT GAA GCT AGC AAA TGG AGC CCT GAA CTA GCT GCT GCT TGT GAA GTA TGG AAG GAG ATT AAA TTT GAA TTC CAA GCA ATG GAT ACG TTG
Pgra187_DNA2  ATG TCA CCA CAA ACA GAG ACT AAA GCA GGT GTT GGA TTC AAG GCT GGT GTT AAA GAT TAT AAA TTG ACT TAT TAT ACT CCT GAC TAT GAA ACC AAA GAT ACT GAT ATC TTG GCA GCA TTC CGA GTA ACT CCT CAA CCT GGA GTT CCG CCC GAG GAA GCA GGG GCC GCA GTA GCT GCT GAA TCT TCT ACT GGT ACA TGG ACA ACT GTG TGG ACC GAC GGG CTT ACC AGT CTT GAT CGT TAT AAG GGA CGA TGC TAC GAC ATC GAG CCC GTT GCT GGA GAA GAA AAT CAA TTT ATT GCT TAT GTA GCT TAC CCC TTA GAC CTT TTT GAA GAA GGT TCT GTT ACT AAC ATG TTT ACT TCC ATT GTG GGT AAT GTA TTT GGG TTC AAA GCC CTA CGC GCT CTA CGT CTG GAG GAT TTG CGA ATT CCT CCT GCT TAT ACT AAA ACT TTT CAA GGC CCA CCT CAT GGT ATC CAA GTT GAA AGA GAT AAA TTG AAC AAG TAT GGT CGC CCC CTA TTG GGC TGT ACT ATT AAA CCT AAA TTG GGG TTA TCC GCT AAG AAT TAC GGT AGA GCA GTT TAT GAA TGT CTA CGC GGT GGA CTT GAT TTT ACC AAA GAT GAT GAG AAC GTG AAC TCC CAA CCA TTT ATG CGT TGG AGA GAT CGT TTC TTA TTT TGT GCC GAA GCA CTT TAT AAA GCA CAG ACT GAA ACC GGT GAA ATC AAA GGG CAT TAT TTA AAC GCT ACT GCA GGT ACA TGC GAA GAA ATG ATG AAA AGG GCT ATA TTT GCC AGA GAA TTG GGA GTT CCT ATT GTA ATG CAT GAC TAC TTA ACA GGG GGA TTC ACC GCA AAC ACT AGT TTG GCT CAT TAT TGC CGA GAT AAT GGT TTA CTT CTT CAC ATC CAT CGC GCA ATG CAT GCA GTT ATT GAT AGA CAG AAA AAT CAT GGT ATA CAC TTT CGT GTA CTA GCT AAG GCA TTA CGT ATG TCT GGT GGA GAT CAT ATT CAC TCT GGT ACC GTA GTA GGT AAA CTT GAA GGG GAA AGA GAC ATA ACT TTG GGT TTT GTT GAT TTA CTG CGT GAT GAT TTT GTT GAA AAA GAT CGA AGC CGC GGT ATT TAT TTC ACT CAA GAT TGG GTC TCT CTA CCG GGT GTT CTG CCC GTG GCT TCG GGG GGT ATT CAC GTT TGG CAT ATG CCT GCT CTG ACC GAG ATC TTT GGA GAT GAT TCC GTA CTA CAA TTC GGT GGA GGA ACT TTA GGG CAC CCT TGG GGA AAT GCA CCT GGT GCC GTT GCT AAT CGA GTA GCT CTA GAA GCA TGT GTA CAA GCT CGT AAT GAG GGA CGT GAT CTT GCT CGT GAG GGT AAT GAA ATT ATC CGT GAA GCT AGC AAA TGG AGC CCT GAA CTA GCT GCT GCT TGT GAA GTA TGG AAG GAG ATA AAA TTT GAA TTC GAA GCA ATG GAT ACG TTG
Phet26_DNA21  ATG TCA CCA CAA ACA GAG ACT AAA GCA GGT GTT GGA TTC AAG GCT GGT GTT AAA GAT TAT AAA TTG ACT TAT TAT ACT CCT GAC TAT GAA ACC AAA GAT ACT GAT ATC TTG GCA GCA TTC CGA GTA ACT CCT CAA CCT GGA GTT CCG CCC GAG GAA GCA GGG GCC GCA GTA GCT GCT GAA TCT TCT ACT GGT ACA TGG ACA ACT GTG TGG ACC GAC GGG CTT ACC AGT CTT GAT CGT TAT AAG GGA CGA TGC TAC GAC ATC GAG CCC GTT GCT GGA GAA GAA AAT CAA TTT ATT GCT TAT GTA GCT TAC CCC TTA GAC CTT TTT GAA GAA GGT TCT GTT ACT AAC ATG TTT ACT TCC ATT GTG GGT AAT GTA TTT GGG TTC AAA GCC CTA CGC GCT CTA CGT CTG GAG GAT TTG CGA ATT CCT CCT GCT TAT GTT AAA ACT TTT CAA GGC CCA CCT CAT GGT ATC CAA GTT GAA AGA GAT AAA TTG AAC AAG TAT GGT CGC CCC CTA TTG GGC TGT ACT ATT AAA CCT AAA TTG GGG TTA TCC GCT AAG AAT TAC GGT AGA GCA GTT TAT GAA TGT CTA CGC GGT GGA CTT GAT TTT ACC AAA GAT GAT GAG AAC GTG AAC TCC CAA CCA TTT ATG CGT TGG AGA GAT CGT TTC TTA TTT TGT GCC GAA GCA CTT TAT AAA GCA CAG GCT GAA ACC GGT GAA ATC AAA GGG CAT TAT TTA AAC GCT ACT GCA GGT ACA TGC GAA GAA ATG ATC AAA AGG GCT GTA TTT GCC AGA GAA TTG GGA GTT CCT ATC GTA ATG CAT GAC TAC TTA ACA GGG GGA TTC ACC GCA AAC ACT AGT TTG GCT CAT TAT TGC CGA GAT AAT GGT TTA CTT CTT CAC ATC CAT CGC GCA ATG CAT GCA GTT ATT GAT AGA CAG AAA AAT CAT GGT ATA CAC TTT CGT GTA CTA GCT AAG GCA TTA CGT ATG TCT GGT GGA GAT CAT ATT CAC TCT GGT ACC GTA GTA GGT AAA CTT GAA GGG GAA AGA GAC ATA ACT TTG GGT TTT GTT GAT TTA CTG CGT GAT GAT TTT GTT GAA AAA GAT CGA AGC CGC GGT ATT TAT TTC ACT CAA GAT TGG GTC TCT CTA CCG GGT GTT CTA CCC GTG GCT TCG GGG GGT ATT CAC GTT TGG CAT ATG CCT GCT CTG ACC GAG ATC TTT GGA GAT GAT TCC GTA CTA CAA TTC GGT GGA GGA ACT TTA GGG CAC CCT TGG GGA AAT GCA CCC GGT GCC GTT GCT AAT CGA GTA GCT CTA GAA GCA TGT GTA CAA GCT CGT AAT GAG GGA CGT GAT CTT GCT CGT GAG GGT AAT GAA ATT ATC CGT GAA GCT AGC AAA TGG AGC CCT GAA CTA GCT GCT GCT TGT GAA GTA TGG AAG GAG ATT AAA TTT GAA TTC CAA GCA ATG GAT ACG TTG
Pmex37_DNA21  ATG TCA CCA CAA ACA GAG ACT AAA GCA GGT GTT GGA TTC AAG GCT GGT GTT AAA GAT TAT AAA TTG ACT TAT TAT ACT CCT GAC TAT GAA ACC AAA GAT ACT GAT ATC TTG GCA GCA TTC CGA GTA ACT CCT CAA CCT GGA GTT CCG CCC GAG GAA GCA GGG GCC GCA GTA GCT GCT GAA TCT TCT ACT GGT ACA TGG ACA ACT GTG TGG ACC GAC GGG CTT ACC AGT CTT GAT CGT TAT AAG GGA CGA TGC TAC GAC ATC GAG CCC GTT GCT GGA GAA GAA AAT CAA TTT ATT GCT TAT GTA GCT TAC CCC TTA GAC CTT TTT GAA GAA GGT TCT GTT ACT AAC ATG TTT ACT TCC ATT GTG GGT AAT GTA TTT GGG TTC AAA GCC CTA CGC GCT CTA CGT CTG GAG GAT TTG CGA ATT CCT ACT GCT TAT GTT AAA ACT TTT CAA GGC CCA CCT CAT GGT ATC CAA GTT GAA AGA GAT AAA TTG AAC AAG TAT GGT CGC CCC CTA TTG GGC TGT ACT ATT AAA CCT AAA TTG GGG TTA TCC GCT AAG AAT TAC GGT AGA GCA GTT TAT GAA TGT CTA CGC GGT GGA CTT GAT TTT ACC AAA GAT GAT GAG AAC GTG AAC TCC CAA CCA TTT ATG CGT TGG AGA GAT CGT TTC TTA TTT TGT GCC GAA GCA CTT TAT AAA GCA CAG GCT GAA ACC GGT GAA ATC AAA GGG CAT TAT TTA AAC GCT ACT GCA GGT ACA TGC GAA GAA ATG ATC AAA AGG GCT GTA TTT GCC AGA GAA TTG GGA GTT CCT ATC GTA ATG CAT GAC TAC TTA ACA GGG GGA TTC ACC GCA AAC ACT AGT TTG GCT CAT TAT TGC CGA GAT AAT GGT TTA CTT CTT CAC ATC CAT CGC GCA ATG CAT GCA GTT ATT GAT AGA CAG AAA AAT CAT GGT ATG CAC TTT CGT GTA CTA GCT AAG GCA TTA CGT ATG TCT GGT GGA GAT CAT ATT CAC TCT GGT ACC GTA GTA GGT AAA CTT GAA GGG GAA AGA GAC ATA ACT TTG GGT TTT GTT GAT TTA CTG CGT GAT GAT TTT ATT GAA AAA GAT CGA AGC CGC GGT ATT TAT TTC ACT CAA GAT TGG GTC TCT CTA CCG GGT GTT CTG CCC GTG GCT TCG GGG GGT ATT CAC GTT TGG CAT ATG CCT GCT CTG ACC GAG ATC TTT GGA GAT GAT TCC GTA CTA CAA TTC GGT GGA GGA ACT TTA GGG CAC CCT TGG GGA AAT GCA CCC GGT GCC GTT GCT AAT CGA GTA GCT CTA GAA GCA TGT GTA CAA GCT CGT AAT GAG GGA CGT GAT CTT GCT CGT GAG GGT AAT GAA ATT ATC CGT GAA GCT AGC AAA TGG AGC CCT GAA CTA GCT GCT GCT TGT GAA GTA TGG AAG GAG ATT AAA TTT GAA TTC CAA GCA ATG GAT ACG TTG
Ptre197_DNA2  ATG TCA CCA CAA ACA GAG ACT AAA GCA GGT GTT GGA TTC AAG GCT GGT GTT AAA GAT TAT AAA TTG ACT TAT TAT ACT CCT GAC TAT GAA ACC AAA GAT ACT GAT ATC TTG GCA GCA TTC CGA GTA ACT CCT CAA CCT GGA GTT CCG CCC GAG GAA GCA GGG GCC GCA GTA GCT GCT GAA TCT TCT ACT GGT ACA TGG ACA ACT GTG TGG ACC GAC GGG CTT ACC AGT CTT GAT CGT TAT AAG GGA CGA TGC TAC GAC ATC GAG CCC GTT GCT GGA GAA GAA AAT CAA TTT ATT GCT TAT GTA GCT TAC CCC TTA GAC CTT TTT GAA GAA GGT TCT GTT ACT AAC ATG TTT ACT TCC ATT GTG GGT AAT GTA TTT GGG TTC AAA GCC CTA CGC GCT CTA CGT CTG GAG GAT TTG CGA ATT CCT CCT GCT TAT ACT AAA ACT TTT CAA GGC CCA CCT CAT GGT ATC CAA GTT GAA AGA GAT AAA TTG AAC AAG TAT GGT CGC CCC CTA TTG GGC TGT ACT ATT AAA CCT AAA TTG GGG TTA TCC GCT AAG AAT TAC GGT AGA GCA GTT TAT GAA TGT CTA CGC GGT GGA CTT GAT TTT ACC AAA GAT GAT GAG AAC GTG AAC TCC CAA CCA TTT ATG CGT TGG AGA GAT CGT TTC TTA TTT TGT GCC GAA GCA CTT TAT AAA GCA CAG ACT GAA ACC GGT GAA ATC AAA GGG CAT TAT TTA AAC GCT ACT GCA GGT ACA TGC GAA GAA ATG ATG AAA AGG GCT ATA TTT GCC AGA GAA TTG GGA GTT CCT ATC GTA ATG CAT GAC TAC TTA ACA GGG GGA TTC ACC GCA AAC ACT AGT TTG GCT CAT TAT TGC CGA GAT AAT GGT TTA CTT CTT CAC ATC CAT CGC GCA ATG CAT GCA GTT ATT GAT AGA CAG AAA AAT CAT GGT ATA CAC TTT CGT GTA CTA GCT AAG GCA TTA CGT ATG TCT GGT GGA GAT CAT ATT CAC TCT GGT ACC GTA GTA GGT AAA CTT GAA GGG GAA AGA GAC ATA ACT TTG GGT TTT GTT GAT TTA CTG CGT GAT GAT TTT GTT GAA AAA GAT CGA AGC CGC GGT ATT TAT TTC ACT CAA GAT TGG GTC TCT CTA CCG GGT GTT CTG CCC GTG GCT TCG GGG GGT ATT CAC GTT TGG CAT ATG CCT GCT CTG ACC GAG ATC TTT GGA GAT GAT TCC GTA CTA CAA TTC GGT GGA GGA ACT TTA GGG CAC CCT TGG GGA AAT GCA CCT GGT GCT GTT GCT AAT CGA GTA GCT CTA GAA GCA TGT GTA CAA GCT CGT AAT GAG GGA CGT GAT CTT GCT CGT GAG GGT AAT GAA ATT ATC CGT GAA GCT AGC AAA TGG AGC CCT GAA CTA GCT GCT GCT TGT GAA GTA TGG AAG GAG ATT AAA TTT GAA TTC GAA GCA ATG GAT ACG TTG
WHR1_DNA225  ATG TCA CCA CAA ACA GAG ACT AAA GCG GGT GTT GGA TTC AAG GCT GGT GTT AAA GAT TAT AAA TTG ACT TAT TAT ACT CCT GAG TAT GAA ACC AAA GAT ACT GAT ATC TTG GCA GCA TTC CGA GTA ACT CCT CAA CCT GGA GTT CCG CCC GAG GAA GCA GGG GCC GCA GTA GCT GCT GAA TCT TCT ACT GGT ACA TGG ACA ACT GTG TGG ACC GAC GGG CTT ACC AGT CTT GAT CGT TAT AAG GGA CGA TGC TAC GAC ATC GAG CCC GTT GCT GGA GAA GAA AAT CAA TTT ATT GCT TAT GTA GCT TAC CCC TTA GAC CTT TTT GAA GAA GGT TCC GTT ACT AAC ATG TTT ACT TCC ATT GTG GGT AAT GTA TTT GGG TTC AAA GCC CTA CGC GCT CTA CGT CTG GAG GAT TTG CGA ATT CCT ACT GCT TAT GTT AAA ACT TTT CAA GGC CCA CCT CAT GGT ATC CAA GTT GAA AGA GAT AAA TTG AAC AAG TAT GGT CGC CCC CTA TTG GGC TGT ACT ATT AAA CCT AAA TTG GGG TTA TCC GCT AAG AAT TAC GGT AGA GCA GTT TAT GAA TGT CTA CGC GGT GGA CTT GAT TTT ACC AAA GAT GAT GAG AAC GTG AAC TCC CAA CCA TTT ATG CGT TGG AGA GAT CGT TTC TTA TTT TGT GCC GAA GCA CTT TAT AAA GCA CAG GCT GAA ACC GGT GAA ATC AAA GGG CAT TAT TTA AAC GCT ACT GCA GGT ACA TGC GAA GAA ATG ATG AAA AGG GCT GTA TTT GCC AGA GAA TTG GGA GTT CCT ATC GTA ATG CAT GAC TAC TTA ACA GGG GGA TTC ACC GCA AAC ACT AGT TTG GCT CAT TAT TGC CGA GAT AAT GGT TTA CTT CTT CAC ATC CAT CGC GCA ATG CAT GCA GTT ATT GAT AGA CAG AAA AAT CAT GGT ATA CAC TTT CGT GTA CTA GCT AAG GCA TTA CGT ATG TCT GGT GGA GAT CAT ATT CAC TCT GGT ACC GTA GTA GGT AAA CTT GAA GGG GAA AGA GAC ATA ACT TTG GGT TTT GTT GAT TTA CTG CGT GAT GAT TTT GTT GAA AAA GAT CGA AGC CGC GGT ATT TAT TTC ACT CAA GAT TGG GTC TCT CTA CCG GGT GTT CTG CCC GTG GCT TCG GGG GGT ATT CAC GTT TGG CAT ATG CCT GCT CTG ACC GAG ATC TTT GGA GAT GAT TCC GTA CTA CAA TTC GGT GGA GGA ACT TTA GGG CAC CCT TGG GGA AAT GCA CCC GGT GCC GTT GCT AAT CGA GTA GCT CTA GAA GCA TGT GTA CAA GCT CGT AAT GAG GGA CGT GAT CTT GCT CGT GAG GGT AAT GAA ATT ATC CGT GAA GCT AGC AAA TGG AGC CCT GAA CTA GCT GCT GCT TGT GAA GTA TGG AAG GAG ATT AAA TTT GAA TTC CAA GCA ATG GAT ACG TTG
YALD273_DNA5  ATG TCA CCA CAA ACA GAG ACT AAA GCA GGT GTT GGA TTC AAG GCT GGT GTT AAA GAT TAT AAA TTG ACT TAT TAT ACT CCT GAC TAT GAA ACC AAA GAT ACT GAT ATC TTG GCA GCA TTC CGA GTA ACT CCT CAA CCT GGA GTT CCG CCC GAG GAA GCA GGG GCC GCA GTA GCT GCT GAA TCT TCT ACT GGT ACA TGG ACA ACT GTG TGG ACC GAC GGG CTT ACC AGT CTT GAT CGT TAT AAG GGA CGA TGC TAC GAC ATC GAG CCC GTT GCT GGA GAA GAA AAT CAA TTT ATT GCT TAT GTA GCT TAC CCC TTA GAC CTT TTT GAA GAA GGT TCT GTT ACT AAC ATG TTT ACT TCC ATT GTG GGT AAT GTA TTT GGG TTC AAA GCC CTA CGC GCT CTA CGT CTG GAG GAT TTG CGA ATT CCT CCT GCT TAT GTT AAA ACT TTT CAA GGC CCA CCT CAT GGT ATC CAA GTT GAA AGA GAT AAA TTG AAC AAG TAT GGT CGC CCC CTA TTG GGC TGT ACT ATT AAA CCT AAA TTG GGG TTA TCC GCT AAG AAT TAC GGT AGA GCA GTT TAT GAA TGT CTA CGC GGT GGA CTT GAT TTT ACC AAA GAT GAT GAG AAC GTG AAC TCC CAA CCA TTT ATG CGT TGG AGA GAT CGT TTC TTA TTT TGT GCC GAA GCA CTT TAT AAA GCA CAG GCT GAA ACC GGT GAA ATC AAA GGG CAT TAT TTA AAC GCT ACT GCA GGT ACA TGC GAA GAA ATG ATC AAA AGG GCT GTA TTT GCC AGA GAA TTG GGA GTT CCT ATC GTA ATG CAT GAC TAC TTA ACA GGG GGA TTC ACC GCA AAC ACT AGT TTG GCT CAT TAT TGC CGA GAT AAT GGT TTA CTT CTT CAC ATC CAT CGC GCA ATG CAT GCA GTT ATT GAT AGA CAG AAA AAT CAT GGT ATA CAC TTT CGT GTA CTA GCT AAG GCA TTA CGT ATG TCT GGT GGA GAT CAT ATT CAC TCT GGT ACC GTA GTA GGT AAA CTT GAA GGG GAA AGA GAC ATA ACT TTG GGT TTT GTT GAT TTA CTG CGT GAT GAT TTT GTT GAA AAA GAT CGA AGC CGC GGT ATT TAT TTC ACT CAA GAT TGG GTC TCT CTA CCG GGT GTT CTA CCC GTG GCT TCG GGG GGT ATT CAC GTT TGG CAT ATG CCT GCT CTG ACC GAG ATC TTT GGA GAT GAT TCC GTA CTA CAA TTC GGT GGA GGA ACT TTA GGG CAC CCT TGG GGA AAT GCA CCC GGT GCC GTT GCT AAT CGA GTA GCT CTA GAA GCA TGT GTA CAA GCT CGT AAT GAG GGA CGT GAT CTT GCT CGT GAG GGT AAT GAA ATT ATC CGT GAA GCT AGC AAA TGG AGC CCT GAA CTA GCT GCT GCT TGT GAA GTA TGG AAG GAG ATT AAA TTT GAA TTC CAA GCA ATG GAT ACG TTG
Pop_trich_ch  ATG TCA CCA CAA ACA GAG ACT AAA GCA GGT GTT GGA TTC AAG GCT GGT GTT AAA GAT TAT AAA TTG ACT TAT TAT ACT CCT GAC TAT GAA ACC AAA GAT ACT GAT ATC TTG GCA GCA TTC CGA GTA ACT CCT CAA CCT GGA GTT CCG CCC GAG GAA GCA GGG GCC GCA GTA GCT GCT GAA TCT TCT ACT GGT ACA TGG ACA ACT GTG TGG ACC GAC GGG CTT ACC AGT CTT GAT CGT TAT AAG GGA CGA TGC TAC GAC ATC GAG CCC GTT GCT GGA GAA GAA AAT CAA TTT ATT GCT TAT GTA GCT TAC CCC TTA GAC CTT TTT GAA GAA GGT TCT GTT ACT AAC ATG TTT ACT TCC ATT GTG GGT AAT GTA TTT GGG TTC AAA GCC CTA CGC GCT CTA CGT CTG GAG GAT TTG CGA ATT CCT CCT GCT TAT GTT AAA ACT TTT CAA GGC CCA CCT CAT GGT ATC CAA GTT GAA AGA GAT AAA TTG AAC AAG TAT GGT CGC CCC CTA TTG GGC TGT ACT ATT AAA CCT AAA TTG GGG TTA TCC GCT AAG AAT TAC GGT AGA GCA GTT TAT GAA TGT CTA CGC GGT GGA CTT GAT TTT ACC AAA GAT GAT GAG AAC GTG AAC TCC CAA CCA TTT ATG CGT TGG AGA GAT CGT TTC TTA TTT TGT GCC GAA GCA CTT TAT AAA GCA CAG GCT GAA ACC GGT GAA ATC AAA GGG CAT TAT TTA AAC GCT ACT GCA GGT ACA TGC GAA GAA ATG ATC AAA AGG GCT GTA TTT GCC AGA GAA TTG GGA GTT CCT ATC GTA ATG CAT GAC TAC TTA ACA GGG GGA TTC ACC GCA AAC ACT AGT TTG GCT CAT TAT TGC CGA GAT AAT GGT TTA CTT CTT CAC ATC CAT CGC GCA ATG CAT GCA GTT ATT GAT AGA CAG AAA AAT CAT GGT ATA CAC TTT CGT GTA CTA GCT AAG GCA TTA CGT ATG TCT GGT GGA GAT CAT ATT CAC TCT GGT ACC GTA GTA GGT AAA CTT GAA GGG GAA AGA GAC ATA ACT TTG GGT TTT GTT GAT TTA CTG CGT GAT GAT TTT GTT GAA AAA GAT CGA AGC CGC GGT ATT TAT TTC ACT CAA GAT TGG GTC TCT CTA CCG GGT GTT CTA CCC GTG GCT TCG GGG GGT ATT CAC GTT TGG CAT ATG CCT GCT CTG ACC GAG ATC TTT GGA GAT GAT TCC GTA CTA CAA TTC GGT GGA GGA ACT TTA GGG CAC CCT TGG GGA AAT GCA CCC GGT GCC GTT GCT AAT CGA GTA GCT CTA GAA GCA TGT GTA CAA GCT CGT AAT GAG GGA CGT GAT CTT GCT CGT GAG GGT AAT GAA ATT ATC CGT GAA GCT AGC AAA TGG AGC CCT GAA CTA GCT GCT GCT TGT GAA GTA TGG AAG GAG ATT AAA TTT GAA TTC CAA GCA ATG GAT ACG TTG



Printing out site pattern counts


         9        225  P

Pdel181_DNA2          AAA AAC AAG AAT ACA ACA ACC ACG ACT ACT AGA AGC AGG AGT ATA ATC ATC ATC ATG ATG ATT ATT CAA CAA CAC CAG CAT CCA CCC CCC CCG CCT CCT CGA CGC CGT CTA CTG CTG CTT GAA GAC GAG GAG GAT GCA GCC GCC GCT GCT GGA GGC GGG GGT GTA GTA GTC GTG GTT GTT GTT TAC TAT TCA TCC TCG TCT TCT TGC TGG TGT TTA TTC TTG TTT
Pfre186_DNA2          ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... A.. ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
Pgra187_DNA2          ... ... ... ... ... G.. ... ... ... .G. ... ... ... ... ... ... ..G ..T ..A ... ..A ... ... G.. ... ... ... ... ... ..T ... ... ... ... ... ... ... ... ... ... ... ... ..C ... ... ... ... ... A.. ... ... ... ... ... A.. ... ... ... ... AC. ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
Phet26_DNA21          ... ... ... ... ... G.. ... ... ... .G. ... ... ... ... ... ... ... ... ..A ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ..A ... ... ... ... ..C ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
Pmex37_DNA21          ... ... ... ... ... G.. ... ... ... .G. ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... A.. ... ... ... ... ... ... ... ... ... ... ..C ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... A.. ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
Ptre197_DNA2          ... ... ... ... ... G.. ... ... ... .G. ... ... ... ... ... ... ..G ... ..A ... ... ... ... G.. ... ... ... ... ... ..T ... ... ... ... ... ... ... ... ... ... ... ... ..C ... ... ... ... ..T A.. ... ... ... ... ... A.. ... ... ... ... AC. ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
WHR1_DNA225           ... ... ... ... ... G.G ... ... ... .G. ... ... ... ... ... ... ..G ... ..A ... ... ... ... ... ... ... ... ... ... ... ... A.. ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ..C ... ... ... ... ... ... ... ...
YALD273_DNA5          ... ... ... ... ... G.. ... ... ... .G. ... ... ... ... ... ... ... ... ..A ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ..A ... ... ... ... ..C ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...
Pop_trich_ch          ... ... ... ... ... G.. ... ... ... .G. ... ... ... ... ... ... ... ... ..A ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ..A ... ... ... ... ..C ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ... ...

   18    6    6    9    5    1    8    1   16    1    6    3    1    1    1
    7    1    1    1    9    1    9    9    1    5    2    9    3    5    1
    2    1   10    6    5   11    9    1    3    9   24    5    1    9   22
   15    4    1    1   23   13    2    9   23    1   12    1    4    1    1
   13    4   13    1    4    1    1    5    3    8    5    9    8   10   14


CODONML (in paml version 4.5, December 2011)  examples/small_taxon_set.nuc
Model: One dN/dS ratio for branches
Codon frequency model: F3x4
ns =   9  ls = 475

Codon usage in sequences
--------------------------------------------------------------------------------------------------------------
Phe TTT 14 14 14 14 14 14 | Ser TCT  6  6  6  6  6  6 | Tyr TAT 13 13 13 13 13 13 | Cys TGT  5  5  5  5  5  5
    TTC  8  8  8  8  8  8 |     TCC  4  4  4  4  4  4 |     TAC  4  4  4  4  4  4 |     TGC  3  3  3  3  3  3
Leu TTA  9  9  9  9  9  9 |     TCA  1  1  1  1  1  1 | *** TAA  0  0  0  0  0  0 | *** TGA  0  0  0  0  0  0
    TTG 10 10 10 10 10 10 |     TCG  1  1  1  1  1  1 |     TAG  0  0  0  0  0  0 | Trp TGG  8  8  8  8  8  8
--------------------------------------------------------------------------------------------------------------
Leu CTT  9  9  9  9  9  9 | Pro CCT 11 11 12 11 10 12 | His CAT  9  9  9  9  9  9 | Arg CGT 11 11 11 11 11 11
    CTC  0  0  0  0  0  0 |     CCC  6  6  5  6  6  5 |     CAC  5  5  5  5  5  5 |     CGC  5  5  5  5  5  5
    CTA  9  9  9 10  9  9 |     CCA  3  3  3  3  3  3 | Gln CAA 10 10  9 10 10  9 |     CGA  6  6  6  6  6  6
    CTG  4  4  4  3  4  4 |     CCG  2  2  2  2  2  2 |     CAG  2  2  2  2  2  2 |     CGG  0  0  0  0  0  0
--------------------------------------------------------------------------------------------------------------
Ile ATT 10 11 10 10 11 10 | Thr ACT 17 17 18 16 17 18 | Asn AAT  9  9  9  9  9  9 | Ser AGT  1  1  2  2  2  2
    ATC  9  9  7  9  9  8 |     ACC  8  8  8  8  8  8 |     AAC  6  6  6  6  6  6 |     AGC  3  3  3  3  3  3
    ATA  1  1  4  2  1  3 |     ACA  6  6  5  5  5  5 | Lys AAA 18 18 18 18 18 18 | Arg AGA  6  6  6  6  6  6
Met ATG 10 10 10  9 10 10 |     ACG  1  1  1  1  1  1 |     AAG  6  6  6  6  6  6 |     AGG  1  1  1  1  1  1
--------------------------------------------------------------------------------------------------------------
Val GTT 15 14 14 15 14 14 | Ala GCT 24 24 23 24 24 24 | Asp GAT 22 22 22 22 22 22 | Gly GGT 23 23 23 23 23 23
    GTC  1  1  1  1  1  1 |     GCC  5  5  5  5  5  4 |     GAC  5  5  6  6  6  6 |     GGC  2  2  2  2  2  2
    GTA 13 13 12 13 13 12 |     GCA 15 15 16 16 16 16 | Glu GAA 24 24 25 24 24 25 |     GGA 13 13 13 13 13 13
    GTG  4  4  4  4  4  4 |     GCG  0  0  0  0  0  0 |     GAG 10 10  9  9  9  9 |     GGG  9  9  9  9  9  9
--------------------------------------------------------------------------------------------------------------

--------------------------------------------------------------------------
Phe TTT 14 14 14 | Ser TCT  5  6  6 | Tyr TAT 13 13 13 | Cys TGT  5  5  5
    TTC  8  8  8 |     TCC  5  4  4 |     TAC  4  4  4 |     TGC  3  3  3
Leu TTA  9  9  9 |     TCA  1  1  1 | *** TAA  0  0  0 | *** TGA  0  0  0
    TTG 10 10 10 |     TCG  1  1  1 |     TAG  0  0  0 | Trp TGG  8  8  8
--------------------------------------------------------------------------
Leu CTT  9  9  9 | Pro CCT 10 11 11 | His CAT  9  9  9 | Arg CGT 11 11 11
    CTC  0  0  0 |     CCC  6  6  6 |     CAC  5  5  5 |     CGC  5  5  5
    CTA  9 10 10 |     CCA  3  3  3 | Gln CAA 10 10 10 |     CGA  6  6  6
    CTG  4  3  3 |     CCG  2  2  2 |     CAG  2  2  2 |     CGG  0  0  0
--------------------------------------------------------------------------
Ile ATT 10 10 10 | Thr ACT 17 16 16 | Asn AAT  9  9  9 | Ser AGT  2  2  2
    ATC  8  9  9 |     ACC  8  8  8 |     AAC  6  6  6 |     AGC  3  3  3
    ATA  2  2  2 |     ACA  5  5  5 | Lys AAA 18 18 18 | Arg AGA  6  6  6
Met ATG 10  9  9 |     ACG  1  1  1 |     AAG  6  6  6 |     AGG  1  1  1
--------------------------------------------------------------------------
Val GTT 15 15 15 | Ala GCT 24 24 24 | Asp GAT 22 22 22 | Gly GGT 23 23 23
    GTC  1  1  1 |     GCC  5  5  5 |     GAC  5  6  6 |     GGC  2  2  2
    GTA 13 13 13 |     GCA 15 16 16 | Glu GAA 24 24 24 |     GGA 13 13 13
    GTG  4  4  4 |     GCG  1  0  0 |     GAG 10  9  9 |     GGG  9  9  9
--------------------------------------------------------------------------

Codon position x base (3x4) table for each sequence.

#1: Pdel181_DNA2
position  1:    T:0.18105    C:0.19368    A:0.23579    G:0.38947
position  2:    T:0.26526    C:0.23158    A:0.30105    G:0.20211
position  3:    T:0.41895    C:0.15579    A:0.28211    G:0.14316
Average         T:0.28842    C:0.19368    A:0.27298    G:0.24491

#2: Pfre186_DNA2
position  1:    T:0.18105    C:0.19368    A:0.23789    G:0.38737
position  2:    T:0.26526    C:0.23158    A:0.30105    G:0.20211
position  3:    T:0.41895    C:0.15579    A:0.28211    G:0.14316
Average         T:0.28842    C:0.19368    A:0.27368    G:0.24421

#3: Pgra187_DNA2
position  1:    T:0.18105    C:0.19158    A:0.24000    G:0.38737
position  2:    T:0.26316    C:0.23158    A:0.30105    G:0.20421
position  3:    T:0.42105    C:0.15158    A:0.28632    G:0.14105
Average         T:0.28842    C:0.19158    A:0.27579    G:0.24421

#4: Phet26_DNA21
position  1:    T:0.18105    C:0.19368    A:0.23368    G:0.39158
position  2:    T:0.26526    C:0.22947    A:0.30105    G:0.20421
position  3:    T:0.41895    C:0.15789    A:0.28632    G:0.13684
Average         T:0.28842    C:0.19368    A:0.27368    G:0.24421

#5: Pmex37_DNA21
position  1:    T:0.18105    C:0.19158    A:0.23789    G:0.38947
position  2:    T:0.26526    C:0.22947    A:0.30105    G:0.20421
position  3:    T:0.41895    C:0.15789    A:0.28211    G:0.14105
Average         T:0.28842    C:0.19298    A:0.27368    G:0.24491

#6: Ptre197_DNA2
position  1:    T:0.18105    C:0.19158    A:0.24000    G:0.38737
position  2:    T:0.26316    C:0.23158    A:0.30105    G:0.20421
position  3:    T:0.42316    C:0.15158    A:0.28421    G:0.14105
Average         T:0.28912    C:0.19158    A:0.27509    G:0.24421

#7: WHR1_DNA225
position  1:    T:0.18105    C:0.19158    A:0.23579    G:0.39158
position  2:    T:0.26526    C:0.22947    A:0.30105    G:0.20421
position  3:    T:0.41684    C:0.15579    A:0.28211    G:0.14526
Average         T:0.28772    C:0.19228    A:0.27298    G:0.24702

#8: YALD273_DNA5
position  1:    T:0.18105    C:0.19368    A:0.23368    G:0.39158
position  2:    T:0.26526    C:0.22947    A:0.30105    G:0.20421
position  3:    T:0.41895    C:0.15789    A:0.28632    G:0.13684
Average         T:0.28842    C:0.19368    A:0.27368    G:0.24421

#9: Pop_trich_ch
position  1:    T:0.18105    C:0.19368    A:0.23368    G:0.39158
position  2:    T:0.26526    C:0.22947    A:0.30105    G:0.20421
position  3:    T:0.41895    C:0.15789    A:0.28632    G:0.13684
Average         T:0.28842    C:0.19368    A:0.27368    G:0.24421

Sums of codon usage counts
------------------------------------------------------------------------------
Phe F TTT     126 | Ser S TCT      53 | Tyr Y TAT     117 | Cys C TGT      45
      TTC      72 |       TCC      37 |       TAC      36 |       TGC      27
Leu L TTA      81 |       TCA       9 | *** * TAA       0 | *** * TGA       0
      TTG      90 |       TCG       9 |       TAG       0 | Trp W TGG      72
------------------------------------------------------------------------------
Leu L CTT      81 | Pro P CCT      99 | His H CAT      81 | Arg R CGT      99
      CTC       0 |       CCC      52 |       CAC      45 |       CGC      45
      CTA      84 |       CCA      27 | Gln Q CAA      88 |       CGA      54
      CTG      33 |       CCG      18 |       CAG      18 |       CGG       0
------------------------------------------------------------------------------
Ile I ATT      92 | Thr T ACT     152 | Asn N AAT      81 | Ser S AGT      16
      ATC      77 |       ACC      72 |       AAC      54 |       AGC      27
      ATA      18 |       ACA      47 | Lys K AAA     162 | Arg R AGA      54
Met M ATG      87 |       ACG       9 |       AAG      54 |       AGG       9
------------------------------------------------------------------------------
Val V GTT     131 | Ala A GCT     215 | Asp D GAT     198 | Gly G GGT     207
      GTC       9 |       GCC      44 |       GAC      51 |       GGC      18
      GTA     115 |       GCA     141 | Glu E GAA     218 |       GGA     117
      GTG      36 |       GCG       1 |       GAG      84 |       GGG      81
------------------------------------------------------------------------------


Codon position x base (3x4) table, overall

position  1:    T:0.18105    C:0.19275    A:0.23649    G:0.38971
position  2:    T:0.26480    C:0.23041    A:0.30105    G:0.20374
position  3:    T:0.41942    C:0.15579    A:0.28421    G:0.14058
Average         T:0.28842    C:0.19298    A:0.27392    G:0.24468

Codon frequencies under model, for use in evolver (TTT TTC TTA TTG ... GGG):
  0.02080748  0.00772882  0.01409988  0.00697451
  0.01810545  0.00672517  0.01226889  0.00606881
  0.02365656  0.00878710  0.00000000  0.00000000
  0.01601000  0.00594683  0.00000000  0.00536643
  0.02215163  0.00822810  0.01501073  0.00742506
  0.01927505  0.00715961  0.01306145  0.00646085
  0.02518476  0.00935474  0.01706608  0.00844174
  0.01704423  0.00633099  0.01154977  0.00571310
  0.02717876  0.01009540  0.01841729  0.00911012
  0.02364937  0.00878443  0.01602564  0.00792709
  0.03090024  0.01147772  0.02093909  0.01035753
  0.02091228  0.00776775  0.01417090  0.00700964
  0.04478716  0.01663594  0.03034936  0.01501232
  0.03897116  0.01447562  0.02640823  0.01306284
  0.05091968  0.01891383  0.03450497  0.01706789
  0.03446079  0.01280027  0.02335185  0.01155100



Nei & Gojobori 1986. dN/dS (dN, dS)
(Note: This matrix is not used in later ML. analysis.
Use runmode = -2 for ML pairwise comparison.)

Pdel181_DNA2
Pfre186_DNA2aaaaaaaa-1.0300 (0.0009 0.0000)
Pgra187_DNA2         1.0623 (0.0093 0.0088) 1.1684 (0.0102 0.0088)
Phet26_DNA21         1.2775 (0.0037 0.0029) 1.5968 (0.0046 0.0029) 0.4758 (0.0056 0.0117)
Pmex37_DNA21        -1.0000 (0.0046 0.0000)-1.0000 (0.0037 0.0000) 0.9534 (0.0084 0.0088) 0.9555 (0.0028 0.0029)
Ptre197_DNA2         1.5965 (0.0093 0.0058) 1.7561 (0.0102 0.0058) 0.0000 (0.0000 0.0088) 0.6357 (0.0056 0.0088) 1.4328 (0.0084 0.0058)
WHR1_DNA225          0.7964 (0.0046 0.0058) 0.9557 (0.0056 0.0058) 0.4430 (0.0065 0.0147) 0.3175 (0.0028 0.0088) 0.6354 (0.0037 0.0058) 0.5548 (0.0065 0.0117)
YALD273_DNA5         1.2775 (0.0037 0.0029) 1.5968 (0.0046 0.0029) 0.4758 (0.0056 0.0117)-1.0000 (0.0000 0.0000) 0.9555 (0.0028 0.0029) 0.6357 (0.0056 0.0088) 0.3175 (0.0028 0.0088)
Pop_trich_ch         1.2775 (0.0037 0.0029) 1.5968 (0.0046 0.0029) 0.4758 (0.0056 0.0117)-1.0000 (0.0000 0.0000) 0.9555 (0.0028 0.0029) 0.6357 (0.0056 0.0088) 0.3175 (0.0028 0.0088)-1.0000 (0.0000 0.0000)

pairwise comparison, codon frequencies: F3x4.


2 (Pfre186_DNA2) ... 1 (Pdel181_DNA2)
lnL =-1891.391969
  0.00214 999.00000 99.00000

t= 0.0021  S=   396.3  N=  1028.7  dN/dS= 99.0000  dN = 0.0010  dS = 0.0000


3 (Pgra187_DNA2) ... 1 (Pdel181_DNA2)
lnL =-1968.029688
  0.02808  3.26389  0.98370

t= 0.0281  S=   341.7  N=  1083.3  dN/dS=  0.9837  dN = 0.0093  dS = 0.0095


3 (Pgra187_DNA2) ... 2 (Pfre186_DNA2)
lnL =-1972.711786
  0.03025  3.71696  1.10191

t= 0.0302  S=   345.4  N=  1079.6  dN/dS=  1.1019  dN = 0.0103  dS = 0.0094


4 (Phet26_DNA21) ... 1 (Pdel181_DNA2)
lnL =-1921.561815
  0.01073  3.11375  1.18654

t= 0.0107  S=   342.5  N=  1082.5  dN/dS=  1.1865  dN = 0.0037  dS = 0.0031


4 (Phet26_DNA21) ... 2 (Pfre186_DNA2)
lnL =-1927.106138
  0.01287  4.25522  1.54964

t= 0.0129  S=   352.0  N=  1073.0  dN/dS=  1.5496  dN = 0.0047  dS = 0.0030


4 (Phet26_DNA21) ... 3 (Pgra187_DNA2)
lnL =-1948.501568
  0.02179  4.30601  0.45869

t= 0.0218  S=   349.8  N=  1075.2  dN/dS=  0.4587  dN = 0.0056  dS = 0.0123


5 (Pmex37_DNA21) ... 1 (Pdel181_DNA2)
lnL =-1920.298777
  0.01053  1.55733 99.00000

t= 0.0105  S=   318.9  N=  1106.1  dN/dS= 99.0000  dN = 0.0045  dS = 0.0000


5 (Pmex37_DNA21) ... 2 (Pfre186_DNA2)
lnL =-1914.616800
  0.00838  0.77696 99.00000

t= 0.0084  S=   296.5  N=  1128.5  dN/dS= 99.0000  dN = 0.0035  dS = 0.0000


5 (Pmex37_DNA21) ... 3 (Pgra187_DNA2)
lnL =-1960.971487
  0.02594  4.03558  0.91514

t= 0.0259  S=   348.1  N=  1076.9  dN/dS=  0.9151  dN = 0.0085  dS = 0.0092


5 (Pmex37_DNA21) ... 4 (Phet26_DNA21)
lnL =-1913.389962
  0.00862  6.08298  0.97563

t= 0.0086  S=   362.3  N=  1062.7  dN/dS=  0.9756  dN = 0.0029  dS = 0.0029


6 (Ptre197_DNA2) ... 1 (Pdel181_DNA2)
lnL =-1961.098136
  0.02585  4.25957  1.53161

t= 0.0258  S=   349.5  N=  1075.5  dN/dS=  1.5316  dN = 0.0094  dS = 0.0061


6 (Ptre197_DNA2) ... 2 (Pfre186_DNA2)
lnL =-1965.694050
  0.02802  4.83643  1.71212

t= 0.0280  S=   352.8  N=  1072.2  dN/dS=  1.7121  dN = 0.0104  dS = 0.0061


6 (Ptre197_DNA2) ... 3 (Pgra187_DNA2)
lnL =-1901.130192
  0.00676  4.05781  0.00100

t= 0.0068  S=   345.2  N=  1079.8  dN/dS=  0.0010  dN = 0.0000  dS = 0.0093


6 (Ptre197_DNA2) ... 4 (Phet26_DNA21)
lnL =-1941.618065
  0.01954  6.78012  0.64571

t= 0.0195  S=   361.6  N=  1063.4  dN/dS=  0.6457  dN = 0.0057  dS = 0.0089


6 (Ptre197_DNA2) ... 5 (Pmex37_DNA21)
lnL =-1953.852896
  0.02372  5.63419  1.43296

t= 0.0237  S=   357.2  N=  1067.8  dN/dS=  1.4330  dN = 0.0086  dS = 0.0060


7 (WHR1_DNA225) ... 1 (Pdel181_DNA2)
lnL =-1936.561781
  0.01511  2.61161  0.72506

t= 0.0151  S=   337.6  N=  1087.4  dN/dS=  0.7251  dN = 0.0046  dS = 0.0064


7 (WHR1_DNA225) ... 2 (Pfre186_DNA2)
lnL =-1941.975543
  0.01725  3.35589  0.90347

t= 0.0172  S=   345.7  N=  1079.3  dN/dS=  0.9035  dN = 0.0056  dS = 0.0062


7 (WHR1_DNA225) ... 3 (Pgra187_DNA2)
lnL =-1960.455637
  0.02624  3.64066  0.41889

t= 0.0262  S=   345.9  N=  1079.1  dN/dS=  0.4189  dN = 0.0065  dS = 0.0156


7 (WHR1_DNA225) ... 4 (Phet26_DNA21)
lnL =-1928.593448
  0.01318  1.68562  0.26826

t= 0.0132  S=   322.2  N=  1102.8  dN/dS=  0.2683  dN = 0.0027  dS = 0.0101


7 (WHR1_DNA225) ... 5 (Pmex37_DNA21)
lnL =-1928.718524
  0.01300  3.82266  0.60956

t= 0.0130  S=   350.1  N=  1074.9  dN/dS=  0.6096  dN = 0.0037  dS = 0.0061


7 (WHR1_DNA225) ... 6 (Ptre197_DNA2)
lnL =-1954.005346
  0.02397  5.04975  0.54692

t= 0.0240  S=   355.1  N=  1069.9  dN/dS=  0.5469  dN = 0.0066  dS = 0.0121


8 (YALD273_DNA5) ... 1 (Pdel181_DNA2)
lnL =-1921.561815
  0.01073  3.11377  1.18654

t= 0.0107  S=   342.5  N=  1082.5  dN/dS=  1.1865  dN = 0.0037  dS = 0.0031


8 (YALD273_DNA5) ... 2 (Pfre186_DNA2)
lnL =-1927.106138
  0.01287  4.25516  1.54964

t= 0.0129  S=   352.0  N=  1073.0  dN/dS=  1.5496  dN = 0.0047  dS = 0.0030


8 (YALD273_DNA5) ... 3 (Pgra187_DNA2)
lnL =-1948.501568
  0.02179  4.30601  0.45869

t= 0.0218  S=   349.8  N=  1075.2  dN/dS=  0.4587  dN = 0.0056  dS = 0.0123


8 (YALD273_DNA5) ... 4 (Phet26_DNA21)
lnL =-1881.846112
  0.00001  8.33165  0.18598

t= 0.0000  S=   369.5  N=  1055.5  dN/dS=  0.1860  dN = 0.0000  dS = 0.0000


8 (YALD273_DNA5) ... 5 (Pmex37_DNA21)
lnL =-1913.389962
  0.00862  6.08296  0.97563

t= 0.0086  S=   362.3  N=  1062.7  dN/dS=  0.9756  dN = 0.0029  dS = 0.0029


8 (YALD273_DNA5) ... 6 (Ptre197_DNA2)
lnL =-1941.618065
  0.01954  6.78014  0.64571

t= 0.0195  S=   361.6  N=  1063.4  dN/dS=  0.6457  dN = 0.0057  dS = 0.0089


8 (YALD273_DNA5) ... 7 (WHR1_DNA225)
lnL =-1928.593448
  0.01318  1.68561  0.26826

t= 0.0132  S=   322.2  N=  1102.8  dN/dS=  0.2683  dN = 0.0027  dS = 0.0101


9 (Pop_trich_ch) ... 1 (Pdel181_DNA2)
lnL =-1921.561815
  0.01073  3.11378  1.18654

t= 0.0107  S=   342.5  N=  1082.5  dN/dS=  1.1865  dN = 0.0037  dS = 0.0031


9 (Pop_trich_ch) ... 2 (Pfre186_DNA2)
lnL =-1927.106138
  0.01287  4.25517  1.54964

t= 0.0129  S=   352.0  N=  1073.0  dN/dS=  1.5496  dN = 0.0047  dS = 0.0030


9 (Pop_trich_ch) ... 3 (Pgra187_DNA2)
lnL =-1948.501568
  0.02179  4.30599  0.45869

t= 0.0218  S=   349.8  N=  1075.2  dN/dS=  0.4587  dN = 0.0056  dS = 0.0123


9 (Pop_trich_ch) ... 4 (Phet26_DNA21)
lnL =-1881.845859
  0.00001  0.40000  0.00100

t= 0.0000  S=   281.0  N=  1144.0  dN/dS=  0.0010  dN = 0.0000  dS = 0.0000


9 (Pop_trich_ch) ... 5 (Pmex37_DNA21)
lnL =-1913.389962
  0.00862  6.08299  0.97562

t= 0.0086  S=   362.3  N=  1062.7  dN/dS=  0.9756  dN = 0.0029  dS = 0.0029


9 (Pop_trich_ch) ... 6 (Ptre197_DNA2)
lnL =-1941.618065
  0.01954  6.78013  0.64571

t= 0.0195  S=   361.6  N=  1063.4  dN/dS=  0.6457  dN = 0.0057  dS = 0.0089


9 (Pop_trich_ch) ... 7 (WHR1_DNA225)
lnL =-1928.593448
  0.01318  1.68561  0.26826

t= 0.0132  S=   322.2  N=  1102.8  dN/dS=  0.2683  dN = 0.0027  dS = 0.0101


9 (Pop_trich_ch) ... 8 (YALD273_DNA5)
lnL =-1881.846052
  0.00001  0.40000  0.16519

t= 0.0000  S=   281.0  N=  1144.0  dN/dS=  0.1652  dN = 0.0000  dS = 0.0000
