LOCUS       DDU63596      310 bp    DNA             INV       14-MAY-1999
DEFINITION  Dictyostelium discoideum Tdd-4 transposable element flanking
            sequence, clone p427/428 right end.
ACCESSION   U63596
NID         g2393749
KEYWORDS    .
SOURCE      Dictyostelium discoideum.
  ORGANISM  Dictyostelium discoideum
            Eukaryota; Dictyosteliida; Dictyostelium.
REFERENCE   1  (bases 1 to 310)
  AUTHORS   Wells,D.J.
  TITLE     Tdd-4, a DNA transposon of Dictyostelium that encodes proteins
            similar to LTR retroelement integrases
  JOURNAL   Nucleic Acids Res. 27 (11), 2408-2415 (1999)
REFERENCE   2  (bases 1 to 310)
  AUTHORS   Wells,D.J. and Welker,D.L.
  TITLE     Dictyostelium discoideum Tdd-4 transposable element, right end
            flanking sequence from clone p427/428
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 310)
  AUTHORS   Wells,D.J. and Welker,D.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-JUL-1996) Biology, Utah State Univ., Logan, UT
            84322-5305, USA
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Dictyostelium discoideum"
                     /strain="AX4"
                     /db_xref="taxon:44689"
                     /clone="p427/428"
     misc_feature    5.12
                     /note="Fuzzy location"
     misc_feature    join(J00194:(100..202),1..245,256..258)
                     /note="Location partly in another entry"
BASE COUNT      118 a     46 c     67 g     79 t
ORIGIN      
        1 gtgacagttg gctgtcagac atacaatgat tgtttagaag aggagaagat tgatccggag
       61 taccgtgata gtattttaaa aactatgaaa gcgggaatac ttaatggtaa actagttaga
      121 ttatgtgacg tgccaagggg tgtagatgta gaaattgaaa caactggtct aaccgattca
      181 gaaggagaaa gtgaatcaaa agaagaagag tgatgatgaa tagccaccat tactgcatac
      241 tgtagccctt acccttgtcg caccattagc cattaataaa aataaaaaat tatataaaaa
      301 ttacacccat 
//
LOCUS       DDU63595       83 bp    DNA             INV       14-MAY-1999
DEFINITION  Dictyostelium discoideum Tdd-4 transposable element flanking
            sequence, clone p427/428 left end.
ACCESSION   U63595
NID         g2393748
KEYWORDS    .
SOURCE      Dictyostelium discoideum.
  ORGANISM  Dictyostelium discoideum
            Eukaryota; Dictyosteliida; Dictyostelium.
REFERENCE   1  (bases 1 to 83)
  AUTHORS   Wells,D.J.
  TITLE     Tdd-4, a DNA transposon of Dictyostelium that encodes proteins
            similar to LTR retroelement integrases
  JOURNAL   Nucleic Acids Res. 27 (11), 2408-2415 (1999)
REFERENCE   2  (bases 1 to 83)
  AUTHORS   Wells,D.J. and Welker,D.L.
  TITLE     Dictyostelium discoideum Tdd-4 transposable element, left end
            flanking sequence from clone p427/428
  JOURNAL   Unpublished
REFERENCE   3  (bases 1 to 83)
  AUTHORS   Wells,D.J. and Welker,D.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-JUL-1996) Biology, Utah State Univ., Logan, UT
            84322-5305, USA
FEATURES             Location/Qualifiers
     source          1..83
                     /organism="Dictyostelium discoideum"
                     /strain="AX4"
                     /db_xref="taxon:44689"
                     /clone="p427/428"
BASE COUNT       31 a     16 c     12 g     24 t
ORIGIN      
        1 ttcgaaggat atctcaaggc agttaataat tactatgatg attgtaaaat attccaaagt
       61 ttcccagacc caccaataat gac
//
LOCUS       HUMBDNF       918 bp    DNA             PRI       31-OCT-1994
DEFINITION  Human brain-derived neurotrophic factor (BDNF) gene, complete cds.
ACCESSION   M37762
VERSION     M37762.1  GI:179402
KEYWORDS    neurotrophic factor.
SOURCE      Human DNA.
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Mammalia;
            Eutheria; Primates; Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 918)
  AUTHORS   Jones,K.R. and Reichardt,L.F.
  TITLE     Molecular cloning of a human gene that is a member of the nerve
            growth factor family
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 87 (20), 8060-8064 (1990)
  MEDLINE   91045937
COMMENT     Draft entry and computer-readable sequence for [Proc. Natl. Acad.
            Sci. U.S.A. (1990) In press] kindly submitted
            by K.R.Jones, 13-AUG-1990.
FEATURES             Location/Qualifiers
     source          1..918
                     /organism="Homo sapiens"
                     /db_xref="taxon:9606"
                     /dev_stage="adult"
     sig_peptide     76..123
                     /gene="NTF3"
                     /note="G00-125-917; putative"
                     /product="brain-derived neurotrophic factor"
     CDS             76..819
                     /gene="BDNF"
                     /note="putative"
                     /codon_start=1
                     /db_xref="GDB:G00-125-916"
                     /product="brain-derived neurotrophic factor"
                     /protein_id="AAA51820.1"
                     /db_xref="GI:179403"
                     /translation="MTILFLTMVISYFGCMKAAPMKEANIRGQGGLAYPGVRTHGTLE
                     SVNGPKAGSRGLTSLADTFEHVIEELLDEDQKVRPNEENNKDADLYTSRVMLSSQVPL
                     EPPLLFLLEEYKNYLDAANMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMS
                     GGTVTVLEKVPVSKGQLKQYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRAL
                     TMDSKKRIGWRFIRIDTSCVCTLTIKRGR"
     gene            76..816
                     /gene="NTF3"
                     /map="12p13"
     gene            76..819
                     /gene="BDNF"
                     /map="11p13"
     mat_peptide     124..816
                     /gene="NTF3"
                     /note="G00-125-917; putative"
                     /product="brain-derived neurotrophic factor"
BASE COUNT      269 a    192 c    237 g    220 t
ORIGIN
        1 ggtgaaagaa agccctaacc agttttctgt cttgtttctg ctttctccct acagttccac
       61 caggtgagaa gagtgatgac catccttttc cttactatgg ttatttcata ctttggttgc
      121 atgaaggctg cccccatgaa agaagcaaac atccgaggac aaggtggctt ggcctaccca
      181 ggtgtgcgga cccatgggac tctggagagc gtgaatgggc ccaaggcagg ttcaagaggc
      241 ttgacatcat tggctgacac tttcgaacac gtgatagaag agctgttgga tgaggaccag
      301 aaagttcggc ccaatgaaga aaacaataag gacgcagact tgtacacgtc cagggtgatg
      361 ctcagtagtc aagtgccttt ggagcctcct cttctctttc tgctggagga atacaaaaat
      421 tacctagatg ctgcaaacat gtccatgagg gtccggcgcc actctgaccc tgcccgccga
      481 ggggagctga gcgtgtgtga cagtattagt gagtgggtaa cggcggcaga caaaaagact
      541 gcagtggaca tgtcgggcgg gacggtcaca gtccttgaaa aggtccctgt atcaaaaggc
      601 caactgaagc aatacttcta cgagaccaag tgcaatccca tgggttacac aaaagaaggc
      661 tgcaggggca tagacaaaag gcattggaac tcccagtgcc gaactaccca gtcgtacgtg
      721 cgggccctta ccatggatag caaaaagaga attggctggc gattcataag gatagacact
      781 tcttgtgtat gtacattgac cattaaaagg ggaagatagt ggatttatgt tgtatagatt
      841 agattatatt gagacaaaaa ttatctattt gtatatatac ataacagggt aaattattca
      901 gttaagaaaa aaataatt
//
LOCUS       NT_010368  161485 bp    DNA             CON       16-NOV-2000
DEFINITION  Homo sapiens chromosome 15 working draft sequence segment, complete
            sequence.
ACCESSION   NT_010368
VERSION     NT_010368.1  GI:11433101
KEYWORDS    HTG.
SOURCE      human.
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Primates; Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 161485)
  AUTHORS   International Human Genome Project collaborators.
  TITLE     Toward the complete sequence of the human genome
  JOURNAL   Unpublished
COMMENT     GENOME ANNOTATION REFSEQ:  NCBI contigs are derived from assembled
            genomic sequence data. They may include both draft and finished
            sequence.
            COMPLETENESS: not full length.
FEATURES             Location/Qualifiers
     source          1..310
                     /organism="Homo sapiens"
                     /db_xref="taxon:9606"
                     /chromosome="15"
     source          order(1..100,251..300,300..310)
                     /note="Doctored from Accession AC011224 
	             sequenced by Whitehead Institute
                     for Biomedical Research"
                     /organism="Homo sapiens"
                     /db_xref="taxon:9606"
                     /clone="RP11-10K20"
     variation       244
                     /replace="T"
                     /replace="A"
                     /db_xref="dbSNP:140670"
ORIGIN      
        1 gtgacagttg gctgtcagac atacaatgat tgtttagaag aggagaagat tgatccggag
       61 taccgtgata gtattttaaa aactatgaaa gcgggaatac ttaatggtaa actagttaga
      121 ttatgtgacg tgccaagggg tgtagatgta gaaattgaaa caactggtct aaccgattca
      181 gaaggagaaa gtgaatcaaa agaagaagag tgatgatgaa tagccaccat tactgcatac
      241 tgtagccctt acccttgtcg caccattagc cattaataaa aataaaaaat tatataaaaa
      301 ttacacccat 
//
LOCUS       HUMBETGLOA              3002 bp    DNA     linear   PRI 26-AUG-1994
DEFINITION  Human haplotype C4 beta-globin gene, complete cds.
ACCESSION   L26462
VERSION     L26462.1  GI:432453
KEYWORDS    beta-globin.
SOURCE      Homo sapiens DNA.
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Primates; Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3002)
  AUTHORS   Fullerton,S.M., Harding,R.M., Boyce,A.J. and Clegg,J.B.
  TITLE     Molecular and population genetic analysis of allelic sequence
            diversity at the human beta-globin locus
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 91 (5), 1805-1809 (1994)
  MEDLINE   94173918
   PUBMED   7907422
FEATURES             Location/Qualifiers
     source          1..3002
                     /organism="Homo sapiens"
                     /db_xref="taxon:9606"
                     /haplotype="C4"
                     /note="sequence found in a Melanesian population"
     variation       111
                     /replace="t"
     variation       263
                     /note="Rsa I polymorphism"
                     /replace="t"
     variation       273
                     /replace="c"
     variation       286..287
                     /note="2 bp insertion of AT"
                     /replace=""
     variation       288
                     /replace="t"
     variation       295..296
                     /note="1 bp deletion of C or 2 bp deletion of CT"
                     /replace=""
     variation       347
                     /replace="c"
     variation       476
                     /replace="t"
     variation       500
                     /replace="c"
     CDS             join(866..957,1088..1310,2161..2289)
                     /codon_start=1
                     /product="beta-globin"
                     /protein_id="AAA21100.1"
                     /db_xref="GI:532506"
                     /translation="MVHLTPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFE
                     SFGDLSTPDAVMGNPKVKAHGKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPE
                     NFRLLGNVLVCVLAHHFGKEFTPPVQAAYQKVVAGVANALAHKYH"
     exon            <866..957
                     /number=1
     variation       874
                     /replace="c"
     intron          958..1087
                     /number=1
     exon            1088..1310
                     /number=2
     intron          1311..2160
                     /number=2
     variation       1326
                     /note="Ava II polymorphism"
                     /replace="g"
     variation       1384
                     /replace="g"
     variation       1391
                     /replace="t"
     variation       1976
                     /replace="t"
     exon            2161..>2289
                     /number=3
     variation       2522
                     /replace="c"
     variation       2602
                     /replace="a"
     variation       2604
                     /replace="c"
     variation       2760
                     /note="Hinf I polymorphism"
                     /replace="t"
     variation       2913
                     /replace="g"
BASE COUNT      810 a    601 c    599 g    992 t
ORIGIN      
        1 acctcctatt tgacaccact gattacccca ttgatagtca cactttgggt tgtaagtgac
       61 tttttattta tttgtatttt tgactgcatt aagaggtctc tagtttttta cctcttgttt
      121 cccaaaacct aataagtaac taatgcacag agcacattga tttgtattta ttctattttt
      181 agacataatt tattagcatg catgagcaaa ttaagaaaaa caacaacaaa tgaatgcata
      241 tatatgtata tgtatgtgtg tacatataca catatatata tatatatatt ttttcttttc
      301 ttaccagaag gttttaatcc aaataaggag aagatatgct tagaactgag gtagagtttt
      361 catccattct gtcctgtaag tattttgcat attctggaga cgcaggaaga gatccatcta
      421 catatcccaa agctgaatta tggtagacaa aactcttcca cttttagtgc atcaacttct
      481 tatttgtgta ataagaaaat tgggaaaacg atcttcaata tgcttaccaa gctgtgattc
      541 caaatattac gtaaatacac ttgcaaagga ggatgttttt agtagcaatt tgtactgatg
      601 gtatggggcc aagagatata tcttagaggg agggctgagg gtttgaagtc caactcctaa
      661 gccagtgcca gaagagccaa ggacaggtac ggctgtcatc acttagacct caccctgtgg
      721 agccacaccc tagggttggc caatctactc ccaggagcag ggagggcagg agccagggct
      781 gggcataaaa gtcagggcag agccatctat tgcttacatt tgcttctgac acaactgtgt
      841 tcactagcaa cctcaaacag acaccatggt gcatctgact cctgaggaga agtctgccgt
      901 tactgccctg tggggcaagg tgaacgtgga tgaagttggt ggtgaggccc tgggcaggtt
      961 ggtatcaagg ttacaagaca ggtttaagga gaccaataga aactgggcat gtggagacag
     1021 agaagactct tgggtttctg ataggcactg actctctctg cctattggtc tattttccca
     1081 cccttaggct gctggtggtc tacccttgga cccagaggtt ctttgagtcc tttggggatc
     1141 tgtccactcc tgatgctgtt atgggcaacc ctaaggtgaa ggctcatggc aagaaagtgc
     1201 tcggtgcctt tagtgatggc ctggctcacc tggacaacct caagggcacc tttgccacac
     1261 tgagtgagct gcactgtgac aagctgcacg tggatcctga gaacttcagg gtgagtctat
     1321 gggacccttg atgttttctt tccccttctt ttctatggtt aagttcatgt cataggaagg
     1381 ggataagtaa cagggtacag tttagaatgg gaaacagacg aatgattgca tcagtgtgga
     1441 agtctcagga tcgttttagt ttcttttatt tgctgttcat aacaattgtt ttcttttgtt
     1501 taattcttgc tttctttttt tttcttctcc gcaattttta ctattatact taatgcctta
     1561 acattgtgta taacaaaagg aaatatctct gagatacatt aagtaactta aaaaaaaact
     1621 ttacacagtc tgcctagtac attactattt ggaatatatg tgtgcttatt tgcatattca
     1681 taatctccct actttatttt cttttatttt taattgatac ataatcatta tacatattta
     1741 tgggttaaag tgtaatgttt taatatgtgt acacatattg accaaatcag ggtaattttg
     1801 catttgtaat tttaaaaaat gctttcttct tttaatatac ttttttgttt atcttatttc
     1861 taatactttc cctaatctct ttctttcagg gcaataatga tacaatgtat catgcctctt
     1921 tgcaccattc taaagaataa cagtgataat ttctgggtta aggcaatagc aatatctctg
     1981 catataaata tttctgcata taaattgtaa ctgatgtaag aggtttcata ttgctaatag
     2041 cagctacaat ccagctacca ttctgctttt attttatggt tgggataagg ctggattatt
     2101 ctgagtccaa gctaggccct tttgctaatc atgttcatac ctcttatctt cctcccacag
     2161 ctcctgggca acgtgctggt ctgtgtgctg gcccatcact ttggcaaaga attcacccca
     2221 ccagtgcagg ctgcctatca gaaagtggtg gctggtgtgg ctaatgccct ggcccacaag
     2281 tatcactaag ctcgctttct tgctgtccaa tttctattaa aggttccttt gttccctaag
     2341 tccaactact aaactggggg atattatgaa gggccttgag catctggatt ctgcctaata
     2401 aaaaacattt attttcattg caatgatgta tttaaattat ttctgaatat tttactaaaa
     2461 agggaatgtg ggaggtcagt gcatttaaaa cataaagaaa tgaagagcta gttcaaacct
     2521 tgggaaaata cactatatct taaactccat gaaagaaggt gaggctgcaa acagctaatg
     2581 cacattggca acagccctga tgcatatgcc ttattcatcc ctcagaaaag gattcaagta
     2641 gaggcttgat ttggaggtta aagttttgct atgctgtatt ttacattact tattgtttta
     2701 gctgtcctca tgaatgtctt ttcactaccc atttgcttat cctgcatctc tcagccttga
     2761 ctccactcag ttctcttgct tagagatacc acctttcccc tgaagtgttc cttccatgtt
     2821 ttacggcgag atggtttctc ctcgcctggc cactcagcct tagttgtctc tgttgtctta
     2881 tagaggtcta cttgaagaag gaaaaacagg ggtcatggtt tgactgtcct gtgagccctt
     2941 cttccctgcc tcccccactc acagtgaccc ggaatctgca gtgctagtct cccggaacta
     3001 tc
//
