ID   RK20_ARATH              Reviewed;         117 AA.
AC   P56795; P56796; P56794;
DT   30-MAY-2000, integrated into UniProtKB/Swiss-Prot.
DT   30-MAY-2000, sequence version 1.
DT   23-JAN-2007, entry version 40.
DE   Chloroplast 50S ribosomal protein L20 (SHIT) (CRAP) .
GN   Name=rpl20; OrderedLocusNames=AtCg00660;
OS   Arabidopsis thaliana (Mouse-ear cress).
OG   Plastid; Chloroplast.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons;
OC   rosids; eurosids II; Brassicales; Brassicaceae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Columbia;
RX   MEDLINE=20039611; PubMed=10574454; DOI=10.1093/dnares/6.5.283;
RA   Sato S., Nakamura Y., Kaneko T., Asamizu E., Tabata S.;
RT   "Complete structure of the chloroplast genome of Arabidopsis
RT   thaliana.";
RL   DNA Res. 6:283-290(1999).
CC   -!- FUNCTION: Binds directly to 23S ribosomal RNA and is necessary for
CC       the in vitro assembly process of the 50S ribosomal subunit. It is
CC       not involved in the protein synthesizing functions of that subunit
CC       (By similarity).
CC   -!- SUBCELLULAR LOCATION: Plastid; chloroplast.
CC   -!- SIMILARITY: Belongs to the ribosomal protein L20P family.
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DR   EMBL; AP000423; BAA84408.1; -; Genomic_DNA.
DR   HSSP; O67086; 1GYZ.
DR   GenomeReviews; AP000423_GR; ATCG00660.
DR   TAIR; AtCg00660; -.
DR   GermOnline; ATCG00660; Arabidopsis thaliana.
DR   GO; GO:0019843; F:rRNA binding; IEA:HAMAP.
DR   GO; GO:0000027; P:ribosomal large subunit assembly and mainte...; IEA:HAMAP.
DR   HAMAP; MF_00382; -; 1.
DR   InterPro; IPR005812; Ribosom_L20_bac.
DR   InterPro; IPR005813; Ribosomal_L20.
DR   PANTHER; PTHR10986; Ribosomal_L20; 1.
DR   Pfam; PF00453; Ribosomal_L20; 1.
DR   PRINTS; PR00062; RIBOSOMALL20.
DR   ProDom; PD002389; Ribosomal_L20; 1.
DR   TIGRFAMs; TIGR01032; rplT_bact; 1.
DR   PROSITE; PS00937; RIBOSOMAL_L20; 1.
KW   Chloroplast; Plastid; Ribonucleoprotein; Ribosomal protein;
KW   RNA-binding; rRNA-binding.
FT   CHAIN         1    117       Chloroplast 50S ribosomal protein L20.
FT                                /FTId=PRO_0000177278.
SQ   SEQUENCE   117 AA;  14163 MW;  C3F643A28C5EDC3F CRC64;
     MTRIKRGYIA RRRRTKLRLF ASSFRGAHSR LTRTMTQQRI RALVSAHRDR GKRKRDFRRL
     WITRINAVIH EMGVFYSYNE FIHNLYKKQL LLNRKILAQI ALLNRSCLYT ISNDIKK
//
ID   Q84JF0_ARATH            Unreviewed;       310 AA.
AC   Q84JF0;
DT   01-JUN-2003, integrated into UniProtKB/TrEMBL.
DT   01-JUN-2003, sequence version 1.
DT   12-DEC-2006, entry version 17.
DE   Putative adenylylsulfate kinase.
GN   ORFNames=At5g67520;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons;
OC   rosids; eurosids II; Brassicales; Brassicaceae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE.
RA   Yamada K., Chan M.M., Chang C.H., Dale J.M., Hsuan V.W., Lee J.M.,
RA   Onodera C.S., Quach H.L., Tang C., Toriumi M., Wong C., Wu H.C.,
RA   Yu G., Yuan S., Carninci P., Chen H., Cheuk R., Hayashizaki Y.,
RA   Ishida J., Jones T., Kamiya A., Kawai J., Kim C.J., Narusaka M.,
RA   Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P.,
RA   Southwick A., Tripp M.G., Wu T., Shinozaki K., Davis R.W., Ecker J.R.,
RA   Theologis A.;
RT   "Arabidopsis Full Length cDNA Clones.";
RL   Submitted (FEB-2003) to the EMBL/GenBank/DDBJ databases.
RN   [2]
RP   NUCLEOTIDE SEQUENCE.
RA   Yamada K., Chan M.M., Chang C.H., Dale J.M., Hsuan V.W., Lee J.M.,
RA   Onodera C.S., Quach H.L., Tang C., Toriumi M., Wong C., Wu H.C.,
RA   Yu G., Yuan S., Carninci P., Chen H., Cheuk R., Hayashizaki Y.,
RA   Ishida J., Jones T., Kamiya A., Kawai J., Kim C.J., Narusaka M.,
RA   Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P.,
RA   Southwick A., Tripp M.G., Wu T., Shinozaki K., Davis R.W., Ecker J.R.,
RA   Theologis A.;
RT   "Arabidopsis Open Reading Frame (ORF) Clones.";
RL   Submitted (MAR-2003) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; BT003977; AAO42019.1; -; mRNA.
DR   EMBL; BT005193; AAO50726.1; -; mRNA.
DR   UniGene; At.28808; -.
DR   HSSP; Q12657; 1M7G.
DR   GenomeReviews; BA000015_GR; AT5G67520.
DR   KEGG; ath:At5g67520; -.
DR   TAIR; At5g67520; -.
DR   ArrayExpress; Q84JF0; -.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0016301; F:kinase activity; IEA:InterPro.
DR   GO; GO:0000103; P:sulfate assimilation; IEA:InterPro.
DR   InterPro; IPR002891; APS_kinase.
DR   Pfam; PF01583; APS_kinase; 1.
DR   ProDom; PD002350; APS_kinase; 1.
DR   TIGRFAMs; TIGR00455; apsK; 1.
KW   Kinase.
SQ   SEQUENCE   310 AA;  34065 MW;  C1AC01A4242A0BDF CRC64;
     MDVAAMARCV GRCYVSPAFG ESESHRLSER RFLKLSSSTN SDPAGSKSLK LRGKIHRRMS
     YFRPIMAKDE SISSRSGETK QINGKQKNIV WHDCPVTKSD RQELIKQKGC VIWITGLSGS
     GKSSLACALS RALHNRGKLS YILDGDNVRH GLNSDLSFEA DDRAENIRRV GEVAKLFADS
     GIICIASLIS PYRIERAACR ALLPQGDFIE VFMDVPLHVC EARDPKGLYK RARAGKIKGF
     TGVDDPYEAP LDCEIVIQNS RDKGLSSSSS SSSSPSSSSS SLCEMADIVV SYLDQNGYLK
     KHSTKSRNCM
//
ID   Q6XJG8_ARATH            Unreviewed;       891 AA.
AC   Q6XJG8;
DT   05-JUL-2004, integrated into UniProtKB/TrEMBL.
DT   05-JUL-2004, sequence version 1.
DT   06-FEB-2007, entry version 20.
DE   26S proteasome subunit RPN1b.
GN   Name=RPN1b;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons;
OC   rosids; eurosids II; Brassicales; Brassicaceae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE.
RX   PubMed=14623884; DOI=10.1074/jbc.M311977200;
RA   Yang P., Fu H., Walker J., Papa C.M., Smalle J., Ju Y.-M.,
RA   Vierstra R.D.;
RT   "Purification of the Arabidopsis 26 S proteasome: biochemical and
RT   molecular analyses revealed the presence of multiple isoforms.";
RL   J. Biol. Chem. 279:6401-6413(2004).
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DR   EMBL; AY230829; AAP86656.1; -; mRNA.
DR   GenomeReviews; CT486007_GR; AT4G28470.
DR   GO; GO:0005829; C:cytosol; IEA:UniProtKB-KW.
DR   GO; GO:0043234; C:protein complex; IEA:UniProtKB-KW.
DR   GO; GO:0000074; P:regulation of progression through cell cycle; IEA:InterPro.
DR   InterPro; IPR002015; APC_proteasome.
DR   InterPro; IPR011989; ARM-like.
DR   Gene3D; G3DSA:1.25.10.10; ARM-like; 1.
DR   Pfam; PF01851; PC_rep; 6.
KW   Proteasome.
FT   MOD_RES     351    351       Phosphoserine; by MAPK12; and MAPK9 (By
FT                                similarity).
FT   MOD_RES     418    418       Phosphoserine (By similarity).
FT   MOD_RES     421    421       Phosphoserine; by MAPK12 (By similarity).
SQ   SEQUENCE   891 AA;  97954 MW;  8330D4146ED9F371 CRC64;
     MAPVPDPNSV GGGAKRDEAT TKIPSKDSKK KDDKKEEDLS EEDLQLKQNL ELYVERVQDP
     NPELQKIALE SMRKEIRDST SSMTSVPKPL KFLRPHYGVL KEFHAKMAES DLKKMLADIL
     SVLALTMSAE GERESLNYRL NGSESDIGSW GHEYVRNLAG EIAKEYTIRQ GEESSIEDLM
     DLVQQIVSFH MKHNAETEAV DLLMDVEDLD LLLEHVDNTN FRRTCNYLTS AAKYLPGPDD
     MLVLDIAYMI YIKFAEYPNA LQIALFLDNM QYVKQVFTSC TDLVKKKQFC YMIARHGMTF
     ELDQEMVAND EDKEALQDIV NNSKLSEGYL TLARDIEVME AKTPEDIYKA HLLDGRASSG
     PSVDSARQNL SATFVNAFVN AGFGQDKLMT VPSDSTSGSA GNWLFKNKEH GKTSAVASLG
     MIQLWDVETG LGHLDKYFHS NDNPVVAGAL LGVGIVNCGI KNDCDPAFAL LSGYIDNEDS
     SVRIGAIMGL GIAYAGSQND QIKIRLSPIL NDANAPLDVI AFAALSLGMI YVGSCNEEVA
     QSIIFALMDR SEAELGEALT RFLPLGLGLL YLGKQESVEA TAEVSKTFNE KIRKYCDMTL
     LSCAYAGTGN VLKVQDLLAQ CGEHLVKGDI HQGPAVIGLA MVAMSEELGL DMEIRSLERV
     LQYGEQNIRR AVPLALGLLC ISNPKVTVMD TLSRLSHDTD SEVAMAAIIS LGLIGAGTNN
     ARIAGMLRNL SSYYYKDASL LFCVRIAQGF VHMGKGLLTL NPFHSERLLL SPTALAGIVT
     LLHACLDMKS IILGKYHYVL YFLVLAMQPR MMLTVDQSLK PISVPVRVGQ AVDVVGQAGR
     PKTITGFQTH STPVLLAAGE RAELATEKYI PLSPILEGFV ILKENPDYRE E
//
ID   CCD51_ARATH            Unreviewed;       323 AA.
AC   Q6NMC8;
DT   05-JUL-2004, integrated into UniProtKB/TrEMBL.
DT   05-JUL-2004, sequence version 1.
DT   06-FEB-2007, entry version 22.
DE   At4g37630 gene protein (Hypothetical protein At4g37630).
GN   Name=RPN1b;
OS   Arabidopsis thaliana (Mouse-ear cress).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons;
OC   rosids; eurosids II; Brassicales; Brassicaceae; Arabidopsis.
OX   NCBI_TaxID=3702;
RN   [1]
RP   NUCLEOTIDE SEQUENCE.
RA   Cheuk R., Chen H., Kim C.J., Shinn P., Carninci P., Hayashizaki Y.,
RA   Ishida J., Kamiya A., Kawai J., Narusaka M., Sakurai T., Satou M.,
RA   Seki M., Shinozaki K., Ecker J.R.;
RL   Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases.
RN   [2]
RP   NUCLEOTIDE SEQUENCE.
RA   Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A.,
RA   Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y.,
RA   Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K.,
RA   Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J.,
RA   Hayashizaki Y., Shinozaki K.;
RT   "Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.";
RL   Submitted (MAR-2005) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; BT011732; AAS49095.1; -; mRNA.
DR   EMBL; AK221431; BAD94450.1; -; mRNA.
DR   UniGene; At.43466; -.
DR   GenomeReviews; CT486007_GR; AT4G37630.
DR   KEGG; ath:At4g37630; -.
DR   TAIR; At4g37630; -.
DR   GO; GO:0000074; P:regulation of progression through cell cycle; IEA:InterPro.
DR   InterPro; IPR006670; Cyclin.
DR   InterPro; IPR011028; Cyclin_like.
DR   InterPro; IPR006671; Cyclin_N.
DR   InterPro; IPR013763; Cyclin_related.
DR   Gene3D; G3DSA:1.10.472.10; Cyclin_related; 1.
DR   Pfam; PF00134; Cyclin_N; 1.
DR   SMART; SM00385; CYCLIN; 1.
KW   Cyclin; Hypothetical protein.
SQ   SEQUENCE   323 AA;  37167 MW;  D10C6BC623769A43 CRC64;
     MGEPKDSLAL FLCHESESSL NEDDDETIER SDKQEPHFTT TIDDEDYVAD LVLKENLRFE
     TLPSKTTSSS DRLIAIDWIL TTRTRFGFQH QTAYIAISYF DLFLHKRFIG LQKDETWAMR
     LLSVACLSLA AKMEERIVPG LSQYPQDHDF VFKPDVIRKT ELLILSTLDW KMNLITPFHY
     FNYFLAKISQ DNHSVSKDLV LLRSSDSLLA LTKEISFTEY RQFVVAAVTT LLASSSTSSD
     IRLTREEIAN KFGSISWWTS NENENVYLCY QRTLEIEERK HMTPPPEIAV SREPPASGSG
     AKRRLSFDDS DQSSPPAKRM RRL
//
