DNACLUST is a tool for clustering millions of short DNA sequences.

Use 'make' to compile. (Use 'make -f Makefile.OSX' on Mac OS X.)
You need a new version of Boost C++ Libraries and GCC C++ compiler in order to compile this program.


Run './dnaclust --help' to see a description of command line options.
For a more detailed manual read 'man doc/dnaclust.1'.

The project web page is at http://dnaclust.sourceforge.net/
If you have any problems, questions or suggestions, please contact Mohammadreza Ghodsi <ghodsi@cs.umd.edu>.

DNACLUST Copyright (C) 2010 Mohammadreza Ghodsi

    This program is free software: you can redistribute it and/or modify
    it under the terms of the GNU General Public License as published by
    the Free Software Foundation, either version 3 of the License, or
    (at your option) any later version.

    This program is distributed in the hope that it will be useful,
    but WITHOUT ANY WARRANTY; without even the implied warranty of
    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
    GNU General Public License for more details.

    You should have received a copy of the GNU General Public License
    along with this program.  If not, see <http://www.gnu.org/licenses/>.
