NAME

Bio::Phylo v.0.01 - An object-oriented Perl module for analyzing and 
manipulating phylogenetic trees. 

DESCRIPTION



INSTALLATION

This module has two external dependencies: Math::Random, and SVG, 
which are both available from CPAN.
 
To install this module, run the following commands: 
perl Makefile.PL
make
make test
make install
 
On Win32, use "nmake" instead of "make":
http://support.microsoft.com/default.aspx?scid=kb;en-us;Q132084
 
Installs without problems on:
 	- perl, v5.8.4 built for MSWin32-x86-multi-thread
 	- perl, v5.8.6 built for cygwin-thread-multi-64int
 	- perl, v5.8.0 built for darwin
 	- perl, v5.8.0 built for sun4-solaris
 	- perl, v5.6.1 built for i386-linux
 	- perl, v5.8.1-RC3 built for darwin-thread-multi-2level 

AUTHOR

Rutger Vos, rvosa@sfu.ca

BUGS

Please report any bugs or feature requests to bug-phylo@rt.cpan.org, 
or through the web interface at
http://rt.cpan.org/NoAuth/ReportBug.html?Queue=Phylo. I will be 
notified, and then you'll automatically be notified of progress 
on your bug as I make changes. 
 
ACKNOWLEDGEMENTS

The author would like to thank Jason Stajich for many ideas borrowed 
from BioPerl (http://www.bioperl.org), and Arne Mooers from the FAB* 
lab (http://www.sfu.ca/~fabstar) for comments and requests. 

SEE ALSO

 The perldoc pages for:
 	- Bio::Phylo
 	- Bio::Phylo::Trees
 		- Bio::Phylo::Trees::Tree
 		- Bio::Phylo::Trees::Node
 	- Bio::Phylo::Taxa
 		- Bio::Phylo::Taxa::Taxon
 	- Bio::Phylo::Matrices
 		- Bio::Phylo::Matrices::Matrix
 		- Bio::Phylo::Matrices::Datum
 	- Bio::Phylo::Parsers
 		- Bio::Phylo::Parsers::Newick
 		- Bio::Phylo::Parsers::Nexus
 		- Bio::Phylo::Parsers::Table
 		- Bio::Phylo::Parsers::Taxlist
 	- Bio::Phylo::Unparsers
 		- Bio::Phylo::Unparsers::Newick
 		- Bio::Phylo::Unparsers::Pagel
 		- Bio::Phylo::Unparsers::Svg
 	- Bio::Phylo::Generator
 	- Bio::Phylo::Listable

COPYRIGHT & LICENSE

Copyright 2005 Rutger Vos, All Rights Reserved. This program is free 
software; you can redistribute it and/or modify it under the same 
terms as Perl itself.