## Bioperl Test Harness Script for Modules

# Before `make install' is performed this script should be runnable with
# `make test'. After `make install' it should work as `perl test.t'

#-----------------------------------------------------------------------
## perl test harness expects the following output syntax only!
## 1..3
## ok 1  [not ok 1 (if test fails)]
## 2..3
## ok 2  [not ok 2 (if test fails)]
## 3..3
## ok 3  [not ok 3 (if test fails)]
##
## etc. etc. etc. (continue on for each tested function in the .t file)
#-----------------------------------------------------------------------


## We start with some black magic to print on failure.
BEGIN { $| = 1; print "1..2\n"; }
END {print "not ok 1\n" unless $loaded;}

use Bio::Tools::SeqAnal;
use Bio::Tools::IUPAC;
use Bio::Seq;

$loaded = 1;
print "ok 1\n";    # 1st test passes.


## End of black magic.
##
## Insert additional test code below but remember to change
## the print "1..x\n" in the BEGIN block to reflect the
## total number of tests that will be run. 

# test IUPAC

my $ambiseq = new Bio::Seq (-seq => 'ARTCGTTGR', -type =>
			    'Dna'); 

my $stream  = new Bio::Tools::IUPAC($ambiseq);
 
while ($uniqueseq = $stream->next_seq()) {
    if( !$uniqueseq->isa('Bio::Seq') ) {
	print "not ok 2\n";
    }
}

print "ok 2\n"     






