# Default configuration file for MRtrix command labelconfig
# Extracts the relevant grey matter parcellations from the default
# FreeSurfer segmentation (desikan_killiany)

0     Unknown

1     ctx-lh-bankssts
2     ctx-lh-caudalanteriorcingulate
3     ctx-lh-caudalmiddlefrontal
4     ctx-lh-cuneus
5     ctx-lh-entorhinal
6     ctx-lh-fusiform
7     ctx-lh-inferiorparietal
8     ctx-lh-inferiortemporal
9     ctx-lh-isthmuscingulate
10    ctx-lh-lateraloccipital
11    ctx-lh-lateralorbitofrontal
12    ctx-lh-lingual
13    ctx-lh-medialorbitofrontal
14    ctx-lh-middletemporal
15    ctx-lh-parahippocampal
16    ctx-lh-paracentral
17    ctx-lh-parsopercularis
18    ctx-lh-parsorbitalis
19    ctx-lh-parstriangularis
20    ctx-lh-pericalcarine
21    ctx-lh-postcentral
22    ctx-lh-posteriorcingulate
23    ctx-lh-precentral
24    ctx-lh-precuneus
25    ctx-lh-rostralanteriorcingulate
26    ctx-lh-rostralmiddlefrontal
27    ctx-lh-superiorfrontal
28    ctx-lh-superiorparietal
29    ctx-lh-superiortemporal
30    ctx-lh-supramarginal
31    ctx-lh-frontalpole
32    ctx-lh-temporalpole
33    ctx-lh-transversetemporal
34    ctx-lh-insula

35    Left-Cerebellum-Cortex

36    Left-Thalamus-Proper
37    Left-Caudate
38    Left-Putamen
39    Left-Pallidum
40    Left-Hippocampus
41    Left-Amygdala
42    Left-Accumbens-area

43    Right-Thalamus-Proper
44    Right-Caudate
45    Right-Putamen
46    Right-Pallidum
47    Right-Hippocampus
48    Right-Amygdala
49    Right-Accumbens-area

50    ctx-rh-bankssts
51    ctx-rh-caudalanteriorcingulate
52    ctx-rh-caudalmiddlefrontal
53    ctx-rh-cuneus
54    ctx-rh-entorhinal
55    ctx-rh-fusiform
56    ctx-rh-inferiorparietal
57    ctx-rh-inferiortemporal
58    ctx-rh-isthmuscingulate
59    ctx-rh-lateraloccipital
60    ctx-rh-lateralorbitofrontal
61    ctx-rh-lingual
62    ctx-rh-medialorbitofrontal
63    ctx-rh-middletemporal
64    ctx-rh-parahippocampal
65    ctx-rh-paracentral
66    ctx-rh-parsopercularis
67    ctx-rh-parsorbitalis
68    ctx-rh-parstriangularis
69    ctx-rh-pericalcarine
70    ctx-rh-postcentral
71    ctx-rh-posteriorcingulate
72    ctx-rh-precentral
73    ctx-rh-precuneus
74    ctx-rh-rostralanteriorcingulate
75    ctx-rh-rostralmiddlefrontal
76    ctx-rh-superiorfrontal     
77    ctx-rh-superiorparietal    
78    ctx-rh-superiortemporal    
79    ctx-rh-supramarginal       
80    ctx-rh-frontalpole         
81    ctx-rh-temporalpole        
82    ctx-rh-transversetemporal  
83    ctx-rh-insula

84    Right-Cerebellum-Cortex

